Dr. Juraj Simunić
Ruđer Bošković Institute
Bijenička 54
HR-10000 Zagreb
Publications
Knjige i poglavlja u knjigama
Poglavlja u knjigama
Juretić, D., Tossi, A., Kamech, N., Ilić, N., Bojović, V., Novković, M., Simunić, J., Petrov, D., Lučić, B., Miljak, M., Ivica, J., Kozić, M. & Vukičević, D. (2013) From Data Collecting to Web servers for Automatic Design of Peptide Antibiotics. U: Paar, V. (ur.) Bioinformatics and biological physics : proceedings of the scientific meeting. Zagreb, Hrvatska akademija znanosti i umjetnosti, str. 63-78. (https://www.bib.irb.hr/680096).
Radovi u časopisima
Znanstveni i pregledni radovi
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Juretić, D., Simunić, J. & Bonačić Lošić, Ž. (2019) Maximum Entropy Production Theorem for Transitions between Enzyme Functional States and Its Applications. Entropy (Basel. Online), 21 (8), 743, 20 doi:10.3390/e21080743.
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Juretić, D. & Simunić, J. (2019) Design of α-helical antimicrobial peptides with a high selectivity index. Expert Opinion on Drug Discovery, 14 (10), 1053-1063 doi:10.1080/17460441.2019.1642322.
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Juretić, D., Bonačić Lošić, Ž., Kuić, D., Simunić, J. & Dobovišek, A. (2019) The maximum entropy production requirement for proton transfers enhances catalytic efficiency for β-lactamases. Biophysical chemistry, 244, 11-21 doi:10.1016/j.bpc.2018.10.004.
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Novak, M., Polak, B., Simunić, J., Boban, Z., Kuzmić, B., Thomae, A., Tolić, I. & Pavin, N. (2018) The mitotic spindle is chiral due to torques within microtubule bundles. Nature Communications, 9, 3571, 10 doi:10.1038/s41467-018-06005-7.
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Rončević, T., Gajski, G., Ilić, N., Goić-Barišić, I., Tonkić, M., Zoranić, L., Simunić, J., Benincasa, M., Mijaković, M., Tossi, A. & Juretić, D. (2017) PGLa-H tandem-repeat peptides active against multidrug resistant clinical bacterial isolates. Biochimica et biophysica acta. Biomembranes, 1859 (2), 228-237 doi:10.1016/j.bbamem.2016.11.011.
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Šamanić, I., Cvitanić, R., Simunić, J. & Puizina, J. (2016) Arabidopsis thalianaMRE11 is essential for activation of cell cycle arrest, transcriptional regulation and DNA repair upon the induction of double-stranded DNA breaks. Plant Biology, 18 (4), 681-694 doi:10.1111/plb.12453.
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Simunić, J. & Tolić, I. (2016) Mitotic Spindle Assembly : Building the Bridge between Sister K-Fibers. Trends in biochemical sciences, 41 (10), 824-833 doi:10.1016/j.tibs.2016.07.004.
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Šamanić, I., Cvitanić, R., Simunić, J. & Puizina, J. (2016) Arabidopsis thaliana MRE11 is essential for activation of the cell cycle arrest, transcriptional regulation and the DNA repair upon the induction of double- stranded DNA breaks. Plant biology, 18 (4), 681-694 doi:10.1111/plb.12453.
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Kozić, M., Vukičević, D., Simunić, J., Rončević, T., Antcheva, N., Tossi, A. & Juretić, D. (2015) Predicting the Minimal Inhibitory Concentration for Antimicrobial Peptides with Rana-Box Domain. Journal of chemical information and modeling, 55 (10), 2275-2287 doi:10.1021/acs.jcim.5b00161.
doi Simunić, J., Petrov, D., Bouceba, T., Kamech, N., Benincasa, M. & Juretić, D. (2014) Trichoplaxin - a new membrane-active antimicrobial peptide from placozoan cDNA.. Biochimica et biophysica acta. Biomembranes, 1838, 1430-1438.
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Simunić, J., Petrov, D., Bouceba, T., Kamech, N., Benincasa, M. & Juretić, D. (2014) Trichoplaxin — A new membrane-active antimicrobial peptide from placozoan cDNA. Biochimica et biophysica acta. Biomembranes, 1838 (5), 1430-1438 doi:10.1016/j.bbamem.2014.02.003.
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Šamanić, I., Simunić, J., Riha, K. & Puizina, J. (2013) Evidence for Distinct Functions of MRE11 in Arabidopsis Meiosis. PLoS One, 8 (10), 1-12 doi:10.1371/journal.pone.0078760.
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Kamech, N., Vukičević, D., Ladram, A., Piesse, C., Vasseur, J., Bojović, V., Simunić, J. & Juretić, D. (2012) Improving the Selectivity of Antimicrobial Peptides from Anuran Skin. Journal of chemical information and modeling, 52 (12), 3341-3351 doi:10.1021/ci300328y.
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Novković, M., Simunić, J., Bojović, V., Tossi, A. & Juretić, D. (2012) DADP: the database of anuran defense peptides. Bioinformatics, 28 (10), 1406-1407 doi:10.1093/bioinformatics/bts141.
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Kamech, N., Simunić, J., Sen, J., Francis, S., Tabitsika, M. & Soyez, D. (2007) Evidence for an angiotensin-converting enzyme (ACE) polymorphism in the crayfish Astacus leptodactylus. Peptides, 28 (7), 1368-1374 doi:10.1016/j.peptides.2007.06.009.
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