J
R
dr. sc. Jelena Repar
10000 Zagreb
Obrazovanje
2012 - Doktorat na Institutu Ruđer Bošković, Poslijediplomski doktorski studij biologije, Prirodoslovno matematički fakultet, Sveučilište u Zagrebu. Rad na popravku DNA i stabilnosti genoma u bakteriji Deinococcus radiodurans (mentor: dr. sc. K. Zahradka, Zavod za molekularnu biologiju, Institut Ruđer Bošković)
2006 - Diploma iz molekularne biologije na Prirodoslovno-matematičkom fakultetu Sveučilišta u Zagrebu, diplomski rad: "Hipovirulentni sojevi u populaciji gljive Cryphonectria parasitica (Murr.) Barr na području Hrvatske Kostajnice" (mentor: prof. M. Ćurković Perica, Botanički odsjek, PMF)
Nagrade i priznanja
2006 - Rektorova nagrada za studentski znanstveni projekt "Analiza horizontalnog prijenosa gena putem obrazaca upotrebe kodona" (mentori: prof. K. Vlahoviček, Odsjek za molekularnu biologiju, PMF i Fran Supek, Institut Ruđer Boškovic, Zagreb)
Istaknute publikacije
Repar Jelena, Supek Fran, Klanjscek Tin, Warnecke Tobias, Zahradka Ksenija, Zahradka Davor. Elevated rate of genome rearrangements in radiation-resistant bacteria. Genetics 205 (2017) 4, 1677-1689
Repar Jelena,Warnecke Tobias. Non-random inversion landscapes in prokaryotic genomes are shaped by heterogeneous selection pressures. Molecular Biology and Evolution 34 (2017) 8, 1902-1911.
Repar Jelena, Briški Nina, Buljubašić Maja, Zahradka Ksenija, Zahradka Davor. Exonuclease VII is involved in “reckless” DNA degradation in UV-irradiated Escherichia coli. Mutation research/Genetic toxicology and environmental mutagenesis. 750 (2013) 1-2, 96-104.
Repar Jelena, Cvjetan Svjetlana, Slade Dea, Radman Miroslav, Zahradka Davor, Zahradka Ksenija. RecA protein assures fidelity of DNA repair and genome stability in Deinococcus radiodurans.DNA repair (Amst.). 9 (2010) 11, 1151-1161.
Publikacije - prilozi u časopisima
Izvorni znanstveni rad
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Supek, Fran ; Škunca, Nives ; Repar, Jelena ; Vlahoviček, Kristian ; Šmuc, Tomislav | Translational Selection Is Ubiquitous in Prokaryotes // PLOS genetics, 6 (2010), 6; e1001004, 13. doi: 10.1371/journal.pgen.1001004
doiwww.plosgenetics.orgjournals.plos.org -
Repar, Jelena ; Cvjetan, Svjetlana ; Slade, Dea ; Radman, Miroslav ; Zahradka, Davor ; Zahradka, Ksenija | RecA protein assures fidelity of DNA repair and genome stability in Deinococcus radiodurans // DNA repair, 9 (2010), 11; 1151-1161. doi: 10.1016/j.dnarep.2010.08.003
doiwww.sciencedirect.comdoi.org -
Buljubašić, Maja ; Repar, Jelena ; Zahradka, Ksenija ; Đermić, Damir ; Zahradka, Davor | RecF recombination pathway in Escherichia coli cells lacking RecQ, UvrD and HelD helicases // DNA repair, 11 (2012), 4; 419-430. doi: 10.1016/j.dnarep.2012.01.011
doidx.doi.orgwww.sciencedirect.com -
Repar, Jelena ; Briški, Nina ; Buljubašić, Maja ; Zahradka, Ksenija ; Zahradka, Davor | Exonuclease VII is involved in "reckless" DNA degradation in UV-irradiated Escherichia coli // Mutation research. Genetic toxicology and environmental mutagenesis, 750 (2013), 1/2; 96-104. doi: 10.1016/j.mrgentox.2012.10.005
doiac.els-cdn.comwww.sciencedirect.comdx.doi.org -
Repar, Jelena ; Zahradka, Davor ; Zahradka, Ksenija | Accuracy of genome reassembly in gamma-irradiated Escherichia coli // Food technology and biotechnology, 51 (2013), 3; 327-337
ftb.com.hrfulir.irb.hr -
Repar, Jelena ; Šućurović, Sandra ; Zahradka, Ksenija ; Zahradka, Davor ; Ćurković-Perica, Mirna | Stress resistance of Escherichia coli and Bacillus subtilis is modulated by auxins // Canadian journal of microbiology, 59 (2013), 11; 766-770. doi: 10.1139/cjm-2013-0266
doiwww.nrcresearchpress.com -
Repar, Jelena ; Supek, Fran ; Klanjšček, Tin ; Warnecke, Tobias ; Zahradka, Ksenija ; Zahradka, Davor | Elevated rate of genome rearrangements in radiation-resistant bacteria // Genetics, 205 (2017), 4; 1677-1689. doi: 10.1534/genetics.116.196154
doiwww.genetics.orgdoi.org -
Repar, Jelena ; Warnecke, Tobias | Mobile introns shape the genetic diversity of host genes // Genetics, 205 (2017), 4; 1641-1648. doi: 10.1534/genetics.116.199059
doibiorxiv.orgwww.genetics.orgdoi.org -
Repar, Jelena ; Warnecke, Tobias | Non-random inversion landscapes in prokaryotic genomes are shaped by heterogeneous selection pressures // Molecular biology and evolution, 34 (2017), 8; 1902-1911. doi: 10.1093/molbev/msx127
doiacademic.oup.comdoi.orgacademic.oup.com -
Krstin, Ljiljana ; Katanić, Zorana ; Repar, Jelena ; Ježić, Marin ; Kobaš, Ana ; Ćurković- Perica, Mirna | Genetic diversity of Cryphonectria hypovirus 1, a biocontrol agent of chestnut blight, in Croatia and Slovenia // Microbial ecology, 79 (2020), 148-163. doi: 10.1007/s00248-019-01377-9
doilink.springer.comdoi.org -
Buljubašić, Maja ; Hlevnjak, Ana ; Repar, Jelena ; Đermić, Damir ; Filić, Vedrana ; Weber, Igor ; Zahradka, Ksenija ; Zahradka, Davor | RecBCD- RecFOR-independent pathway of homologous recombination in Escherichia coli // DNA repair, 83 (2019), 102670, 16. doi: 10.1016/j.dnarep.2019.102670
doidoi.orgwww.sciencedirect.com -
Repar, Jelena ; Zahradka, Davor ; Sović, Ivan ; Zahradka, Ksenija | Characterization of gross genome rearrangements in Deinococcus radiodurans recA mutants // Scientific reports, 11 (2021), 1; 10939, 11. doi: 10.1038/s41598-021-89173-9
doiwww.nature.comdoi.orgfulir.irb.hr -
Lozica, Liča ; Repar, Jelena ; Gottstein, Željko | Longitudinal study on the effect of autogenous vaccine application on the sequence type and virulence profiles of Escherichia coli in broiler breeder flocks // Veterinary microbiology, 259 (2021), 109159, 12. doi: 10.1016/j.vetmic.2021.109159
doiwww.sciencedirect.comdoi.org -
Korenčić, Damir ; Ristov, Strahil ; Repar, Jelena ; Šnajder, Jan | A Topic Coverage Approach to Evaluation of Topic Models // IEEE access, 9 (2021), 123280-123312. doi: 10.1109/access.2021.3109425
doiieeexplore.ieee.orgieeexplore.ieee.orgfulir.irb.hr -
Zahradka, Ksenija ; Repar, Jelena ; Đermić, Damir ; Zahradka, Davor | Chromosome Segregation and Cell Division Defects in Escherichia coli Recombination Mutants Exposed to Different DNA-Damaging Treatments // Microorganisms, 11 (2023), 3; 11030701, 30. doi: 10.3390/microorganisms11030701
doiwww.mdpi.comfulir.irb.hr -
Zahradka, Ksenija ; Repar, Jelena ; Đermić, Damir ; Zahradka, Davor | Genetic analysis of transductional recombination in Escherichia coli reveals differences in the postsynaptic stages of RecBCD and RecFOR pathways // Periodicum biologorum, 124 (2022), 3-4; 97-106. doi: 10.18054/pb.v124i3-4.23604
doihrcak.srce.hrhrcak.srce.hrdoi.orgfulir.irb.hr -
Smolko, Ana; Repar, Jelena; Matković, Marija; Pavlović, Iva; Penčik, Aleš; Novak, Ondrej; Ludwig-Mueller, Jutta; Salopek-Sondi, Branka | Application of Long-Chained Auxin Conjugates Influenced Auxin Metabolism and Transcriptome Response in Brassica rapa L. ssp. pekinensis // International journal of molecular sciences, 25 (2024), 1; 447, 18. doi: 10.3390/ijms25010447
doifulir.irb.hrwww.mdpi.com
Publikacije - prilozi sa skupa (u zborniku)
Sažetak izlaganja sa skupa
Novak Agbaba, S. ; Ćelepirović, N. ; Krstin, Ljiljana ; Repar, Jelena ; Rigling, D. ; Ćurković Perica, Mirna | Populacijska struktura gljive Cryphonectria Parasitica Murr, Barr. u Hrvatskoj Kostajnici // 2. hrvatski botanički kongres 2007, knjiga sažetaka / Britvec, Mihaela ; Škvorc, Željko (ur.). Zagreb, 2007. str. 160-161
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Repar, Jelena ; Škunca, Nives ; Supek, Fran ; Šmuc, Tomislav | An XML format for peptide datasets // ECCB'08 European Conference on Computational Biology. 2008
www.eccb08.org Repar, Jelena ; Cvjetan, Svjetlana ; Zahradka, Davor ; Radman, Miroslav ; Zahradka, Ksenija | Popravak DNA i stabilnost genoma u bakteriji Deinococcus radiodurans // 50 godina molekularne biologije u Hrvatskoj - Zbornik sažetaka / Zahradka, Ksenija ; Plohl, Miroslav ; Ambriović-Ristov, Andreja (ur.). Zagreb: Institut Ruđer Bošković, 2008. str. 32-32
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Škunca, Nives ; Supek, Fran ; Repar, Jelena ; Šmuc, Tomislav | Evaluation of intergene distances across bacterial species // ECCB 2008 Proceedings. 2008
www.eccb08.org Supek, Fran ; Šmuc, Tomislav ; Repar, Jelena ; Škunca, Nives | GORBI: Web application for the prediction of a protein's functional context // The 3rd Adriatic Meeting on Computational Solutions in the Life Sciences - Book of Abstracts / Babić, Darko ; Došlić, Nađa ; Smith, David et al. (ur.). Zagreb: Institute of Computational Life Sciences (ICLS), 2009. str. 76-76
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Repar, Jelena ; Zahradka, Davor ; Zahradka, Ksenija | Degree of synteny between the genomes of radiation-resistant species of Deinococcus does not reflect their extreme dsDNA break repair capabilities // 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology – ISMB/ECCB 2011. 2011
www.iscb.org Repar, Jelena ; Cvjetan, Svjetlana ; Slade, Dea ; Radman, Miroslav ; Zahradka, Davor ; Zahradka, Ksenija | Fidelity of DNA repair and genome stability in Deinococcus radiodurans // Book of Abstracts of the 3rd Congress of Croatian Geneticists with international participation / Franekić, Jasna ; Garaj-Vrhovac, Verica (ur.). Zagreb: Hrvatsko genetičko društvo, 2012. str. 10-10
Buljubašić, Maja ; Repar, Jelena ; Zahradka, Ksenija ; Đermić, Damir ; Zahradka, Davor | Roles of RecQ, UvrD and HelD helicases in the RecF recombination pathway of Escherichia coli // Book of Abstracts of the 3rd Congress of Croatian Geneticists with international participation / Franekić, Jasna ; Garaj-Vrhovac, Verica (ur.). Zagreb: Hrvatsko genetičko društvo, 2012. str. 11-11
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Repar, Jelena ; Supek, Fran ; Zahradka, Davor ; Zahradka, Ksenija | Elevated rate of gene order change in radiation-resistant Deinococci // FEMS 2013 - 5th Congress of European Microbiologists. 2013
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Zahradka, Ksenija ; Repar, Jelena ; Buljubašić, Maja ; Zahradka, Davor | ExoI, ExoVII and SbcCD nucleases participate in "reckless" DNA degradation in Escherichia coli // BioMicroWorld 2013 - Book of Abstracts. 2013. str. 534-534
www.biomicroworld2013.org Zahradka, Ksenija ; Hlevnjak, Ana ; Repar, Jelena ; Buljubašić, Maja ; Zahradka, Davor | Genetic differences in postsynaptic stages of two recombinational repair pathways in Escherichia coli // EEMGS 2016 Annual Meeting - Programme & Abstract book / EEMGS (ur.). Kopenhagen, 2016. str. 146-146
Repar, Jelena ; Supek, Fran ; Zahradka, Davor ; Zahradka, Ksenija | Environmentally induced increase of rearrangement rates in radiation resistant prokaryotes // SMBE 2015 Abstract Book. 2015
Repar, Jelena ; Warnecke, Tobias | Replication-related constraints on the evolution of archaeal genome structure // Molecular Biology of Archaea 5 Poster Abstract Book. 2016
Repar, Jelena ; Warnecke, Tobias | Selection and mutation bias shape inversion landscapes across prokaryotic genomes // The Biology and Physics of Bacterial Chromatin Organization. 2016
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Repar, Jelena ; Supek, Fran ; Klanjscek, Tin ; Warnecke, Tobias ; Zahradka, Ksenija ; Zahradka, Davor | Genome rearrangements in radiation-resistant bacteria // 4th Congress of Croatian Geneticists with international participation : Book of Abstracts / Šarčević, Hrvoje ; Ugarković, Đurđica ; Vujaklija, Dušica et al. (ur.). Zagreb: Hrvatsko genetičko društvo, 2018. str. 24-24
pubweb.carnet.hr -
Buljubašić, Maja ; Zahradka, Ksenija ; Hlevnjak, Ana ; Repar, Jelena ; Đermić, Damir ; Zahradka, Davor | RecBCD- RecFOR-independent pathway of homologous recombination in Escherichia coli // 4th Congress of Croatian Geneticists with international participation - Book of Abstracts / Šarčević, Hrvoje ; Ugarković, Đurđica ; Vujaklija, Dušica et al. (ur.). Zagreb: Hrvatsko genetičko društvo, 2018. str. 25-25
pubweb.carnet.hr Lozica, Liča ; Horvatek Tomić, Danijela ; Repar, Jelena ; Gottstein, Željko | Effect of autogenous vaccine on the phylogenetic relationship and virulence profiles of avian pathogenic E. coli isolated from broiler breeder flocks // 8th International Congress "Veterinary Science and Profession"- Book of Abstracts / Brkljača Bottegaro, Nika ; Zdolec, Nevijo ; Vrbanac, Zoran (ur.). Zagreb: Veterinarski fakultet Sveučilišta u Zagrebu, 2019. str. 68-68
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Krstin, Ljiljana ; Katanić, Zorana ; Repar, Jelena ; Ježić, Marin ; Kobaš, Ana ; Lučić, Katarina ; Ćurković-Perica, Mirna | Association between phenotype of hypovirulent Cryphonectria parasitica isolates and Cryphonectria hypovirus 1 sequence variations // FEMS Online Conference on Microbiology - Electronic Abstract Book. 2020. str. 418-418
fems-microbiology.org -
Zahradka, Ksenija ; Repar, Jelena ; Đermić, Damir ; Zahradka, Davor | Chromosome segregation and cell division defects in Escherichia coli after induction of double- strand DNA breaks // Power of Microbes in Industry and Environment 2023 : Book of Abstracts / Teparić, Renata ; Leboš Pavunc, Andreja ; Kifer, Domagoj (ur.). Zagreb: Hrvatsko mikrobiološko društvo, 2023. str. 73-73
hmd-cms.hr
Publikacije - prilozi sa skupa (u časopisu)
Sažetak izlaganja sa skupa
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Krstin, Ljiljana ; Katanić, Zorana ; Repar, Jelena ; Ježić, Marin ; Kobaš, Ana ; Ćurković-Perica, Mirna | Molecular characterization of Chryphonectria hypovirus 1 from Slovenia // Botanica Serbica / Anačkov, Goran ; Zorić, Lana ; Stevanović, Branka (ur.). 2018. str. 164-164
botanicaserbica.bio.bg.ac.rs
Publikacije - prilozi sa skupa (neobjavljeni)
Neobjavljeni prilog sa skupa
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Repar, Jelena | Elevated rate of genome rearrangements in radiation resistant bacteria // CEGSDM 2016 - Central European Genome Stability and Dynamics Meeting | Zagreb, Hrvatska, 15.10.2016-16.10.2016
www.irb.hr
Publikacije - ocjenski radovi
Diplomski rad
Repar, Jelena | Hipovirulentni sojevi u populaciji gljive Cryphonectria parasitica (Murr.) Barr na području Hrvatske Kostajnice / Ćurković Perica, Mirna (mentor); | Zagreb, Prirodoslovno-matematički fakultet, Zagreb, . 2006
Doktorska disertacija
Repar, Jelena | Točnost popravka DNA u stanicama bakterije Deinococcus radiodurans nakon gama-zračenja / Zahradka, Ksenija (mentor); | Zagreb, Prirodoslovno-matematički fakultet, Zagreb, . 2012