Master's of Molecular Biotechnology - Faculty of Food Technology and Biotechnology, University of Zagreb

• Developing and use of innovative validation procedures and AI algorithms in advancing predictive molecular toxicology models for better health and environmental protection - AdvanceToxicityModel

  01.10.2026 - 30.09.2029 | 121,210.00 EUR

  CroRISIRB

Short communication

• Gaćeša, Ranko; Baranašić, Damir; Starčević, Antonio; Diminić, Janko; Korlević, Marino; Najdek-Dragić, Mirjana; Blažina, Maria; Oršolić, Davor; Kolesarić, Domagoj; Long, Paul F. et al. | Bioprospecting for Genes Encoding Hydrocarbon-Degrading Enzymes from Metagenomic Samples Isolated from Northern Adriatic Sea Sediments // Food technology and biotechnology, 56 (2018), 2; 270-277. doi: 10.17113/ftb.56.02.18.5393

  doihrcak.srce.hrftb.com.hrfulir.irb.hr

Original scientific paper

• Tomić, Snježana; Kapicl Ivković, Tatjana; Milković Periša, Marija; Đunđerović, Duško; Jovičić Milentijević, Maja; Oprić, Svetlana; Mitrović, Slobodanka; Jovanić, Irena; Popovska, Savelina; Bachurska, Svitlana et al. | Concordance of HER2-low scoring in breast carcinomas among pathologists // Scientific reports, 15 (2025), 1; 24781, 8. doi: 10.1038/s41598-025-09839-6

  doifulir.irb.hrwww.nature.com

• Oršolić, Davor; Šmuc, Tomislav | Dynamic applicability domain (dAD): compound–target binding affinity estimates with local conformal prediction // Bioinformatics, 39 (2023), 8; btad465, 12. doi: 10.1093/bioinformatics/btad465

  doiacademic.oup.comfulir.irb.hrfulir.irb.hr

• Raos, Dora; Oršolić, Davor; Mašić, Silvija; Tomić, Miroslav; Krasić, Jure; Tomašković, Igor; Nikolac Gabaj, Nora; Gelo, Nina; Kaštelan, Željko; Kuliš, Tomislav et al. | cfDNA methylation in liquid biopsies as potential testicular seminoma biomarker // Epigenomics, 14 (2022), 23; 1493-1507. doi: 10.2217/epi-2022-0331

  doifulir.irb.hrpubmed.ncbi.nlm.nih.govwww.futuremedicine.com

• Oršolić, Davor ; Pehar, Vesna ; Šmuc, Tomislav ; Stepanić, Višnja | Comprehensive machine learning based study of the chemical space of herbicides // Scientific reports, 11 (2021), 11479, 12. doi: 10.1038/s41598-021-90690-w

  doiwww.nature.comdoi.orgfulir.irb.hr

• Cichońska, Anna ; Ravikumar, Balaguru ; Allaway, Robert J. ; Wan, Fangping ; Park, Sungjoon ; Isayev, Olexandr ; Li, Shuya ; Mason, Michael ; Lamb, Andrew ; Tanoli, Ziaurrehman et al. | Crowdsourced mapping of unexplored target space of kinase inhibitors // Nature communications, 12 (2021), 3307, 18. doi: 10.1038/s41467-021-23165-1

  doiwww.nature.comdoi.orgfulir.irb.hr

Conference abstract

• Stepanić, Višnja ; Oršolić, Davor ; Pehar, Vesna ; Šmuc, Tomislav | Development of phytotoxic natural molecules as complementary herbicidal agents is supported by machine learning study // Book of Abstracts of 1st international conference "Food & Climate Change". | Koprivnica, 2021. str. 39-39

  perspire.eu

• Stepanić, Višnja ; Oršolić, Davor ; Šmuc, Tomislav | (Re)purposing starts virtually by predictive machine-learning models // 27th Croatian Meeting of Chemists and Chemical Engineers and 5th Symposium Vladimir Prelog : Book of Abstracts. | Zagreb: Hrvatsko kemijsko društvo, 2021. str. 16-16

  27hskiki.hkd.hr

• Pehar, Vesna ; Oršolić, Davor ; Stepanić, Višnja | Structure-Activity Relationships for Herbicides // 17. Ružičkini dani "Danas znanost – sutra industrija" : knjiga sažetaka = 17th Ružička days "Today science – tomorrow industry" : Book of Abstracts. | Osijek: Prehrambeno tehnološki fakultet Sveučilišta Josipa Jurja Strossmayera u Osijeku ; Hrvatsko društvo kemijskih inženjera i tehnologa (HDKI), 2018. str. 101-101

Conference abstract

• Raos, Dora ; Oršolić, Davor ; Mašić, Silvija ; Tomić, Miroslav ; Barešić, Anja ; Sinčić, Nino | Novel seminoma biomarker from liquid biopsies // FEBS Open Bio, 12, S1, 2022. str. 72-72

Unpublished conference paper

• Stepanić, Višnja ; Oršolić, Davor ; Šmuc, Tomislav | Machine learning in chemical compound space // Mini-simpozij Hrvatskog kemijskog društva Rijeka 2022. | Rijeka, Hrvatska, 04.07.2022-04.07.2022

  www.biotech.uniri.hr

• Oršolić, Davor ; Lučić, Bono ; Stepanić, Višnja ; Šmuc, Tomislav | Prediction of Drug-Kinase Binding Affinities with Focus on Conserved Protein Kinase Domain // ISMB/ECCB 2021 (29th Annual Conference) | Virtual Event, 25.07.2021-30.07.2021