Dr. Damir Đermić
D
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Molecular Biology Department
Featured Publications
Ivanković S, Ðermić D, DNA End Resection Controls the Balance between Homologous and Illegitimate Recombination in Escherichia coli. PLoS ONE 7(6) (2012): e39030. doi:10.1371/journal.pone.0039030
Đermić D, Functions of multiple exonucleases are essential for cell viability, DNA repair and homologous recombination in recD mutants of Escherichia coli. Genetics. 172 (2006) 4; 2057-2069
Đermić D, Zahradka D, Petranović M, Exonuclease requirements for recombination of lambda phage in recD mutants of Escherichia coli. Genetics. 173 (2006) 4; 2399-2402
Đermić D, Halupecki E, Zahradka D, Petranović M, RecBCD enzyme overproduction impairs DNA repair and homologous recombination in Escherichia coli. Research in Microbiology. 156 (2005) 3; 304-311
Csitkovits CV, Đermić D, Zechner LE, Concomitant reconstitution of TraI-catalyzed DNA transferase and DNA helicase activity in vitro. The Journal of Biological Chemistry. 279 (2004) 44; 45477-45484
Publications
Books and book chapters
Book chapters
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Filipič, B., Gradišnik, L., Rihar, K., Pereyra, A., Đermić, D. & Mazija, H. (2020) Royal Jelly and Human Interferon-Alpha (HuIFN-αN3) Affect Proliferation, Glutathione Level, and Lipid Peroxidation in Human Colorectal Adenocarcinoma Cells In Vitro. U: Mansour, M. (ur.) Lipid Peroxidation Research. London, UK, IntechOpen, str. 65-76 doi:10.5772/intechopen.85777.
doiwww.intechopen.com
Journal articles
Scientific and review papers
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Zahradka, K., Repar, J., Đermić, D. & Zahradka, D. (2023) Chromosome Segregation and Cell Division Defects in Escherichia coli Recombination Mutants Exposed to Different DNA-Damaging Treatments. Microorganisms, 11 (3), 11030701, 30 doi:10.3390/microorganisms11030701.
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Zahradka, K., Repar, J., Đermić, D. & Zahradka, D. (2022) Genetic analysis of transductional recombination in Escherichia coli reveals differences in the postsynaptic stages of RecBCD and RecFOR pathways. Periodicum biologorum, 124 (3-4), 97-106 doi:10.18054/pb.v124i3-4.23604.
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Feliciello, I., Đermić, E., Malović, H., Ivanković, S., Zahradka, D., Ljubić, S., Procino, A. & Đermić, D. (2022) Regulation of ssb Gene Expression in Escherichia coli. International journal of molecular sciences, 23 (18), 10917, 14 doi:10.3390/ijms231810917.
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Martinko, K., Ivanković, S., Edyta, Đ. & Damir, Đ. (2022) Phenylboronic acid as a novel agent for controlling plant pathogenic bacteria. Pest management science, 78 (6), 2417-2422 doi:10.1002/ps.6872.
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Martinko, K., Ivanković, S., Đermić, E. & Đermić, D. (2022) In vitro antifungal effect of phenylboronic and boric acid on Alternaria alternata. Arhiv za higijenu rada i toksikologiju, 73 (1), 83-87 doi:10.2478/aiht-2022-73-3620.
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Martinko, K., Ivanković, S., Lazarević, B., Đermić, E. & Đermić, D. (2022) Control of early blight fungus (Alternaria alternata) in tomato by boric and phenylboronic acid. Antibiotics, 11 (3), 320, 12 doi:10.3390/antibiotics11030320.
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Filipič, B., Rihar, K., Gregorič, D., Gradišnik, L., Pereyra, A., Đermić, D., Daničić, Č. & Mazija, H. (2019) Enhancing Effect of 100.414-kHz Electromagnetic Field Produced by Defender’s Pulse Generator on the ChIFN γ-Like Molecule Inducing Capacity of Lens culinaris Agglutinin and 10% PBS Washouts of Different Holocene Minerals. Technology in cancer research & treatment, 18, 1-8 doi:10.1177/1533033818821093.
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Buljubašić, M., Hlevnjak, A., Repar, J., Đermić, D., Filić, V., Weber, I., Zahradka, K. & Zahradka, D. (2019) RecBCD- RecFOR-independent pathway of homologous recombination in Escherichia coli. DNA repair, 83, 102670, 16 doi:10.1016/j.dnarep.2019.102670.
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Bratko, F., Lidija, G., Adriana, P., Rok, K., Klemen, R., Eva, R., Snežana, K., Damir, Đ., Eugen, Š., Nicola, V., Alfredo, F. & Hrvoje Mazija (2018) Additive Effects of Water-Soluble Propolis (Greit 120) and Human Interferon Alfa (HuIFN- αN3) against Influenza Viruses in Vitro. Journal of agricultural science and technology A, 8 (1), 36-47 doi:10.17265/2161-6256/2018.01.005.
doiwww.davidpublisher.orgfulir.irb.hr -
Feliciello, I., Zahradka, D., Zahradka, K., Ivanković, S., Puc, N. & Đermić, D. (2018) RecF, UvrD, RecX and RecN proteins suppress DNA degradation at DNA double-strand breaks in Escherichia coli. Biochimie, 148, 116-126 doi:10.1016/j.biochi.2018.03.005.
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Marasović, M., Ivanković, S., Stojković Ranko, Đermić, D., Galić, B. & Miloš, M. (2017) In vitro and in vivo antitumour effects of phenylboronic acid against mouse mammary adenocarcinoma 4T1 and squamous carcinoma SCCVII cells.. Journal of enzyme inhibition and medicinal chemistry, 32 (1), 1299-1304 doi:10.1080/14756366.2017.1384823.
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Đermić, E., Zahradka, D., Vujaklija, D., Ivanković, S. & Đermić, D. (2017) 3'-terminated Overhangs Regulate DNA Double-Strand Break Processing in Escherichia coli. G3-Genes Genomes Genetics, 7 (9), 3091-3102 doi:10.1534/g3.117.043521.
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Ivanković, S., Vujaklija, D. & Đermić, D. (2017) Nucleolytic degradation of 3′-ending overhangs is essential for DNA-end resection in RecA-loading deficient recB mutants of Escherichia coli. DNA repair, 57, 56-65 doi:10.1016/j.dnarep.2017.06.024.
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Đermić, D. (2015) Double-strand break repair mechanisms in Escherichia coli: Recent insights. Advances in genomics and genetics, 5, 35-42 doi:10.2147/AGG.S51699.
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Ivanković, S. & Đermić, D. (2012) DNA End Resection Controls the Balance between Homologous and Illegitimate Recombination in Escherichia coli. PLoS One, 7 (6), e39030, 12 doi:10.1371/journal.pone.0039030.
doifulir.irb.hrwww.plosone.org -
Godena, S., Bendini, A., Giambanelli, E., Cerretani, L., Ðermić, D. & Ðermić, E. (2012) Cherry leafroll virus: Impact on olive fruit and virgin olive oil quality. European journal of lipid science and technology, 114 (5), 535-541 doi:10.1002/ejlt.201100277.
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Buljubašić, M., Repar, J., Zahradka, K., Đermić, D. & Zahradka, D. (2012) RecF recombination pathway in Escherichia coli cells lacking RecQ, UvrD and HelD helicases. DNA repair, 11 (4), 419-430 doi:10.1016/j.dnarep.2012.01.011.
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Đermić, E., Cvjetković, B. & Đermić, D. (2006) The antibiotic sensitivity of Croatian isolates of Erwinia amylovora (Burrill) Winslow et al.. Acta horticulturae, 704, 455-457 doi:10.17660/ActaHortic.2006.704.71.
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Halupecki, E., Bazzi, C., Jock, S., Geider, K., Đermić, D. & Cvjetković, B. (2006) Characterization of Erwinia amylovora strains from Croatia. European Journal of Plant Pathology, 114 (4), 435-440 doi:10.1007/s10658-006-0003-7.
doi Đermić, D., Zahradka, D. & Petranović, M. (2006) Exonuclease requirements for recombination of lambda phage in recD mutants of Escherichia coli. Genetics, 173 (4), 2399-2402.
Đermić, D. (2006) Functions of multiple exonucleases are essential for cell viability, DNA repair and homologous recombination in recD mutants of Escherichia coli.. Genetics, 172 (4), 2057-2069. (https://www.bib.irb.hr/247162).
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Zahradka, K., Šimić, S., Buljubašić, M., Petranović, M., Đermić, D. & Zahradka, D. (2006) sbcB15 and delsbcB mutations activate two types of RecF recombination pathway in Escherichia coli. Journal of bacteriology, 188 (21), 7562-7571 doi:10.1128/JB.00613-06.
doi Đermić, D., Đermić, E., Zahradka, D., Petranović, M. & Lerš, N. (2006) Gamma-irradiated RecD overproducers become permanent recB-/C- phenocopies for extrachromosomal DNA processing due to prolonged titration of RecBCD enzyme on damaged Escherichia coli chromosome. Biochimie, 88 (3-4), 379-386. (https://www.bib.irb.hr/229862).
Đermić, D., Halupecki, E., Zahradka, D. & Petranović, M. (2005) RecBCD enzyme overproduction impairs DNA repair and homologous recombination in Escherichia coli. Research in microbiology, 156 (3), 304-311.
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Csitkovits, C., Đermić, D. & Zechner, L. (2004) Concomitant reconstitution of TraI-catalyzed DNA transesterase and DNA helicase activity in vitro. Journal of biological chemistry, 279 (44), 45477-45484 doi:10.1074/jbc.M407970200.
doiwww.sciencedirect.com Zahradka, K., Zahradka, D., Đermić, D., Džidić, S. & Petranović, M. (2002) The inactivation of free phages in UV-irradiated Escherichia coli. Periodicum Biologorum, 104 (4), 399-403.
Zahradka, D., Zahradka, K., Džidić, S., Đermić, D. & Petranović, M. (2002) The rus-1 mutation suppresses cytological defects in recBC sbcBC ruv mutants of Escherichia coli. Periodicum Biologorum, 104 (4), 389-397.
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Zahradka, D., Zahradka, K., Petranović, M., Đermić, D. & Brčić-Kostić, K. (2002) The RuvABC resolvase is indispensable for recombinational repair in sbcB15 mutants of Escherichia coli. Journal of bacteriology, 184 (15), 4141-4147 doi:10.1128/JB.184.15.4141-4147.2002.
doi Salaj-Šmic, E., Đermić, D., Brčić-Kostić, K., Čogelja Čajo, G. & Trgovčević, Ž. (2000) In vivo studies of the Escherichia coli RecB polypeptide lacking ist nuclease center. Research in Microbiology, 151 (9), 769-776.
Đermić, D. & Trgovčević, Ž. (1999) Specific effects of a recB mutation on the HfrH strain of Escherichia coli. Journal of bacteriology, 181 (4), 1334-1337.
Trgovčević, Ž., Salaj-Šmic, E., Ivančić, I. & Đermić, D. (1998) Conjugation in Escherichia coli: Difference in the molecular mechanism of F self-transmission and Hfr transfer. Periodicum biologorum, 100 (3), 273-276.
Conference proceedings papers
Scientific conference proceedings papers
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Martinko, K., Tolvajčić, P., Đermić, E. & Đermić, D. (2021) Determination of minimum inhibitory concentration of boric acid on phytopathogenic bacterium Pseudomonas tomato. U: Rozman, V. & Antunović, Z. (ur.)56. hrvatski i 16. međunarodni simpozij agronoma : zbornik radova = 56th Croatian and 16th International Symposium on Agriculture : Proceedings.
www.bib.irb.hr
Theses
Doctoral dissertation
Đermić, D. (2003) 'Regulation of the activities of RecBCD enzyme in Escherichia coli', doktorska disertacija, Prirodoslovno-matematički fakultet, Zagreb.
Master thesis
Đermić, D. (1998) 'Specific role of RecBCD enzyme on conjugation in Escherichia coli bacterium', magistarski rad, Prirodoslovno-matematički fakultet, Zagreb.
Membership in professional associations / societies
Croatian genetics society
Croatian microbiological society