dr. sc. Damir Đermić
D
Đ
10 000 Zagreb
Obrazovanje
1990. - 1995. Prirodoslovno-matematički fakultet Sveučilišta u Zagrebu, smjer Molekularna biologija: zvanje: dipl. ing. biologije.
1995. - 1998. Poslijediplomski studij smjera Molekularna i stanična biologija na Prirodoslovno-matematičkom fakultetu, Sveučilište u Zagrebu, akademski stupanj: magistar znanosti (biologija)
2003. Obranjena doktorska disertacija: „Regulacija aktivnosti enzima RecBCD u bakteriji Escherichia coli“, akademski stupanj: doktor prirodnih znanosti (biologija)
Projekti
2020.-2024. “Regulacija popravka dvolančanog loma u genomu bakterije Escherichia coli“ (HRZZ, IP-2019-04-3790)
2018.-2020. "Istraživanje protutumorskih i antimikrobnih učinaka vodenih iscrpina graba (Carpinus betulus) i američke platane (Platanus occidentalis)" (Hrvatski Institut za Eksperimentalnu i Translacijsku Onkologiju, 003-2018)
Nagrade i priznanja
2012. g. godišnja nagrada Instituta „Ruđer Bošković“ za znanstveno-istraživački rad
Istaknute publikacije
Feliciello I, Zahradka D, Zahradka K, Ivanković S, Puc N, Đermić D, RecF, UvrD, RecX and RecN proteins suppress DNA degradation at DNA double-strand breaks in Escherichia coli. Biochimie 148 (2018) 116-126.
Ivanković S, Vujaklija D, Đermić D, Nucleolytic degradation of 3′-ending overhangs is essential for DNA-end resection in RecA-loading deficient recB mutants of Escherichia coli. DNA Repair 57 (2017) 56-65.
Đermić E, Zahradka D, Vujaklija D, Ivanković S, Đermić D, 3′-Terminated Overhangs Regulate DNA Double-Strand Break Processing in Escherichia coli. G3: Genes|Genomes|Genetics, 7 (2017) 3091–3102. doi.org/10.1534/g3.117.043521
Marasović M., Ivanković S., Stojković R., Đermić D., Galić B., Miloš M, In vitro and in vivo antitumour effects of phenylboronic acid against mouse mammary adenocarcinoma 4T1 and squamous carcinoma SCCVII cells. J. Enzyme Inhib. Med. Chem. 32 (2017) 1299-1304.
Đermić D, Double-strand break repair mechanisms in Escherichia coli: Recent insights. Adv. Genomics Genet. 5 (2015) 35-42.
Ivanković S, Ðermić D, DNA End Resection Controls the Balance between Homologous and Illegitimate Recombination in Escherichia coli. PLoS ONE 7(6) (2012): e39030. doi:10.1371/journal.pone.0039030
Đermić D, Functions of multiple exonucleases are essential for cell viability, DNA repair and homologous recombination in recD mutants of Escherichia coli. Genetics. 172 (2006) 4; 2057-2069
Đermić D, Zahradka D, Petranović M, Exonuclease requirements for recombination of lambda phage in recD mutants of Escherichia coli. Genetics. 173 (2006) 4; 2399-2402
Đermić D, Halupecki E, Zahradka D, Petranović M, RecBCD enzyme overproduction impairs DNA repair and homologous recombination in Escherichia coli. Research in Microbiology. 156 (2005) 3; 304-311
Csitkovits CV, Đermić D, Zechner LE, Concomitant reconstitution of TraI-catalyzed DNA transferase and DNA helicase activity in vitro. The Journal of Biological Chemistry. 279 (2004) 44; 45477-45484
Publikacije
Knjige i poglavlja u knjigama
Poglavlja u knjigama
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Filipič, B., Gradišnik, L., Rihar, K., Pereyra, A., Đermić, D. & Mazija, H. (2020) Royal Jelly and Human Interferon-Alpha (HuIFN-αN3) Affect Proliferation, Glutathione Level, and Lipid Peroxidation in Human Colorectal Adenocarcinoma Cells In Vitro. U: Mansour, M. (ur.) Lipid Peroxidation Research. London : Delhi, IntechOpen, str. 65-76 doi:10.5772/intechopen.85777.
doiwww.intechopen.com
Radovi u časopisima
Znanstveni i pregledni radovi
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Zahradka, K., Repar, J., Đermić, D. & Zahradka, D. (2023) Chromosome Segregation and Cell Division Defects in Escherichia coli Recombination Mutants Exposed to Different DNA-Damaging Treatments. Microorganisms, 11 (3), 11030701, 30 doi:10.3390/microorganisms11030701.
doiwww.mdpi.comfulir.irb.hr -
Zahradka, K., Repar, J., Đermić, D. & Zahradka, D. (2022) Genetic analysis of transductional recombination in Escherichia coli reveals differences in the postsynaptic stages of RecBCD and RecFOR pathways. Periodicum biologorum, 124 (3-4), 97-106 doi:10.18054/pb.v124i3-4.23604.
doihrcak.srce.hrhrcak.srce.hrdoi.orgfulir.irb.hr -
Feliciello, I., Đermić, E., Malović, H., Ivanković, S., Zahradka, D., Ljubić, S., Procino, A. & Đermić, D. (2022) Regulation of ssb Gene Expression in Escherichia coli. International journal of molecular sciences, 23 (18), 10917, 14 doi:10.3390/ijms231810917.
doiwww.mdpi.comfulir.irb.hr -
Martinko, K., Ivanković, S., Edyta, Đ. & Damir, Đ. (2022) Phenylboronic acid as a novel agent for controlling plant pathogenic bacteria. Pest management science, 78 (6), 2417-2422 doi:10.1002/ps.6872.
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Martinko, K., Ivanković, S., Đermić, E. & Đermić, D. (2022) In vitro antifungal effect of phenylboronic and boric acid on Alternaria alternata. Arhiv za higijenu rada i toksikologiju, 73 (1), 83-87 doi:10.2478/aiht-2022-73-3620.
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Martinko, K., Ivanković, S., Lazarević, B., Đermić, E. & Đermić, D. (2022) Control of early blight fungus (Alternaria alternata) in tomato by boric and phenylboronic acid. Antibiotics, 11 (3), 320, 12 doi:10.3390/antibiotics11030320.
doiwww.mdpi.comfulir.irb.hr -
Filipič, B., Rihar, K., Gregorič, D., Gradišnik, L., Pereyra, A., Đermić, D., Daničić, Č. & Mazija, H. (2019) Enhancing Effect of 100.414-kHz Electromagnetic Field Produced by Defender’s Pulse Generator on the ChIFN γ-Like Molecule Inducing Capacity of Lens culinaris Agglutinin and 10% PBS Washouts of Different Holocene Minerals. Technology in cancer research & treatment, 18, 1-8 doi:10.1177/1533033818821093.
doijournals.sagepub.comdoi.orgfulir.irb.hr -
Buljubašić, M., Hlevnjak, A., Repar, J., Đermić, D., Filić, V., Weber, I., Zahradka, K. & Zahradka, D. (2019) RecBCD- RecFOR-independent pathway of homologous recombination in Escherichia coli. DNA repair, 83, 102670, 16 doi:10.1016/j.dnarep.2019.102670.
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Bratko, F., Lidija, G., Adriana, P., Rok, K., Klemen, R., Eva, R., Snežana, K., Damir, Đ., Eugen, Š., Nicola, V., Alfredo, F. & Hrvoje Mazija (2018) Additive Effects of Water-Soluble Propolis (Greit 120) and Human Interferon Alfa (HuIFN- αN3) against Influenza Viruses in Vitro. Journal of agricultural science and technology A, 8 (1), 36-47 doi:10.17265/2161-6256/2018.01.005.
doiwww.davidpublisher.orgfulir.irb.hr -
Feliciello, I., Zahradka, D., Zahradka, K., Ivanković, S., Puc, N. & Đermić, D. (2018) RecF, UvrD, RecX and RecN proteins suppress DNA degradation at DNA double-strand breaks in Escherichia coli. Biochimie, 148, 116-126 doi:10.1016/j.biochi.2018.03.005.
doi -
Marasović, M., Ivanković, S., Stojković Ranko, Đermić, D., Galić, B. & Miloš, M. (2017) In vitro and in vivo antitumour effects of phenylboronic acid against mouse mammary adenocarcinoma 4T1 and squamous carcinoma SCCVII cells.. Journal of enzyme inhibition and medicinal chemistry, 32 (1), 1299-1304 doi:10.1080/14756366.2017.1384823.
doi -
Đermić, E., Zahradka, D., Vujaklija, D., Ivanković, S. & Đermić, D. (2017) 3'-terminated Overhangs Regulate DNA Double-Strand Break Processing in Escherichia coli. G3-Genes Genomes Genetics, 7 (9), 3091-3102 doi:10.1534/g3.117.043521.
doi -
Ivanković, S., Vujaklija, D. & Đermić, D. (2017) Nucleolytic degradation of 3′-ending overhangs is essential for DNA-end resection in RecA-loading deficient recB mutants of Escherichia coli. DNA repair, 57, 56-65 doi:10.1016/j.dnarep.2017.06.024.
doifulir.irb.hr -
Đermić, D. (2015) Double-strand break repair mechanisms in Escherichia coli: Recent insights. Advances in genomics and genetics, 5, 35-42 doi:10.2147/AGG.S51699.
doi -
Ivanković, S. & Đermić, D. (2012) DNA End Resection Controls the Balance between Homologous and Illegitimate Recombination in Escherichia coli. PLoS One, 7 (6), e39030, 12 doi:10.1371/journal.pone.0039030.
doifulir.irb.hrwww.plosone.org -
Godena, S., Bendini, A., Giambanelli, E., Cerretani, L., Ðermić, D. & Ðermić, E. (2012) Cherry leafroll virus: Impact on olive fruit and virgin olive oil quality. European journal of lipid science and technology, 114 (5), 535-541 doi:10.1002/ejlt.201100277.
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Buljubašić, M., Repar, J., Zahradka, K., Đermić, D. & Zahradka, D. (2012) RecF recombination pathway in Escherichia coli cells lacking RecQ, UvrD and HelD helicases. DNA repair, 11 (4), 419-430 doi:10.1016/j.dnarep.2012.01.011.
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Đermić, E., Cvjetković, B. & Đermić, D. (2006) The antibiotic sensitivity of Croatian isolates of Erwinia amylovora (Burrill) Winslow et al.. Acta horticulturae, 704, 455-457 doi:10.17660/ActaHortic.2006.704.71.
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Halupecki, E., Bazzi, C., Jock, S., Geider, K., Đermić, D. & Cvjetković, B. (2006) Characterization of Erwinia amylovora strains from Croatia. European Journal of Plant Pathology, 114 (4), 435-440 doi:10.1007/s10658-006-0003-7.
doi Đermić, D., Zahradka, D. & Petranović, M. (2006) Exonuclease requirements for recombination of lambda phage in recD mutants of Escherichia coli. Genetics, 173 (4), 2399-2402.
Đermić, D. (2006) Functions of multiple exonucleases are essential for cell viability, DNA repair and homologous recombination in recD mutants of Escherichia coli.. Genetics, 172 (4), 2057-2069. (https://www.bib.irb.hr/247162).
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Zahradka, K., Šimić, S., Buljubašić, M., Petranović, M., Đermić, D. & Zahradka, D. (2006) sbcB15 and delsbcB mutations activate two types of RecF recombination pathway in Escherichia coli. Journal of bacteriology, 188 (21), 7562-7571 doi:10.1128/JB.00613-06.
doi Đermić, D., Đermić, E., Zahradka, D., Petranović, M. & Lerš, N. (2006) Gamma-irradiated RecD overproducers become permanent recB-/C- phenocopies for extrachromosomal DNA processing due to prolonged titration of RecBCD enzyme on damaged Escherichia coli chromosome. Biochimie, 88 (3-4), 379-386. (https://www.bib.irb.hr/229862).
Đermić, D., Halupecki, E., Zahradka, D. & Petranović, M. (2005) RecBCD enzyme overproduction impairs DNA repair and homologous recombination in Escherichia coli. Research in microbiology, 156 (3), 304-311.
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Csitkovits, C., Đermić, D. & Zechner, L. (2004) Concomitant reconstitution of TraI-catalyzed DNA transesterase and DNA helicase activity in vitro. Journal of biological chemistry, 279 (44), 45477-45484 doi:10.1074/jbc.M407970200.
doiwww.sciencedirect.com Zahradka, K., Zahradka, D., Đermić, D., Džidić, S. & Petranović, M. (2002) The inactivation of free phages in UV-irradiated Escherichia coli. Periodicum Biologorum, 104 (4), 399-403.
Zahradka, D., Zahradka, K., Džidić, S., Đermić, D. & Petranović, M. (2002) The rus-1 mutation suppresses cytological defects in recBC sbcBC ruv mutants of Escherichia coli. Periodicum Biologorum, 104 (4), 389-397.
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Zahradka, D., Zahradka, K., Petranović, M., Đermić, D. & Brčić-Kostić, K. (2002) The RuvABC resolvase is indispensable for recombinational repair in sbcB15 mutants of Escherichia coli. Journal of bacteriology, 184 (15), 4141-4147 doi:10.1128/JB.184.15.4141-4147.2002.
doi Salaj-Šmic, E., Đermić, D., Brčić-Kostić, K., Čogelja Čajo, G. & Trgovčević, Ž. (2000) In vivo studies of the Escherichia coli RecB polypeptide lacking ist nuclease center. Research in Microbiology, 151 (9), 769-776.
Đermić, D. & Trgovčević, Ž. (1999) Specific effects of a recB mutation on the HfrH strain of Escherichia coli. Journal of bacteriology, 181 (4), 1334-1337.
Trgovčević, Ž., Salaj-Šmic, E., Ivančić, I. & Đermić, D. (1998) Conjugation in Escherichia coli: Difference in the molecular mechanism of F self-transmission and Hfr transfer. Periodicum biologorum, 100 (3), 273-276.
Radovi u zbornicima skupova
Znanstveni radovi u zbornicima skupova
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Martinko, K., Tolvajčić, P., Đermić, E. & Đermić, D. (2021) Određivanje minimalne inhibitorne koncentracije borne kiseline u suzbijanju fitopatogene bakterije Pseudomonas tomato. U: Rozman, V. & Antunović, Z. (ur.)56. hrvatski i 16. međunarodni simpozij agronoma : zbornik radova = 56th Croatian and 16th International Symposium on Agriculture : Proceedings.
www.bib.irb.hr
Ocjenski radovi
Doktorske disertacije
Đermić, D. (2003) 'Regulacija aktivnosti enzima RecBCD u bakteriji Escherichia coli', doktorska disertacija, Prirodoslovno-matematički fakultet, Zagreb.
Magistarski radovi
Đermić, D. (1998) 'Specifična uloga enzima RecBCD pri konjugaciji u bakteriji Escherichia coli', magistarski rad, Prirodoslovno-matematički fakultet, Zagreb.
Članstva u profesionalnim udrugama / društvima
Hrvatsko genetičko društvo
Hrvatsko mikrobiološko društvo
Hrvatsko društvo za biokemiju i molekularnu biologiju