Shakya, Pallavi; Maulana, Muhammad I.; Danchin, Etienne G. J.; Voogt, M. Laurens; van de Ruitenbeek, Stefan J. S.; Gimeno, Jacinta; Taranto, Adam P.; Blundell, Alison C.; Despot-Slade, Evelin; Meštrović, Nevenka et al. High-resolution genome assembly and linkage mapping in Meloidogyne hapla reveal non-canonical telomere repeats and recombination hotspots associated with effector proteins// Plos pathogens, 21 (2025), 11; 1-30. doi: 10.1371/journal.ppat.1013706
Veseljak, Damira; Despot-Slade, Evelin; Volarić, Marin; Horvat, Lucija; Vojvoda Zeljko, Tanja; Meštrović, Nevenka; Mravinac, Brankica | Dynamic evolution of satellite DNAs drastically differentiates the genomes of Tribolium sibling species// Genome research, 35 (2025), 2445-2460. doi: 10.1101/gr.280516.125
Mota APZ; Koutsovoulos GD; Perfus-Barbeoch L; Despot-Slade E; Labadie K; Aury JM; Robbe-Sermesant K, Bailly-Bechet M, Belser C; Péré A; Rancurel C;, Kozlowski DK; Hassanaly-Goulamhoussen R, Da Rocha M; Noel B; Meštrović N, Wincker P; Danchin EGJ. Unzipped genome assemblies of polyploid root-knot nematodes reveal unusual and clade-specific telomeric repeats. Nature communications 2024, 15:773. https://doi.org/10.1038/s41467-024-44914-y
Volarić, Marin; Meštrović, Nevenka; Despot-Slade, Evelin | SatXplor—a comprehensive pipeline for satellite DNA analyses in complex genome assemblies //Briefings in bioinformatics, 26 (2024), 1; bbae660, 12. doi: 10.1093/bib/bbae660
Volarić, Marin; Despot-Slade, Evelin; Veseljak, Damira; Mravinac, Brankica; Meštrović, Nevenka | Long-read genome assembly of the insect model organism Tribolium castaneum reveals spread of satellite DNA in gene-rich regions by recurrent burst events // Genome research, 34 (2024), 11; 1878-1894. doi: 10.1101/gr.279225.124
Evelin Despot‑Slade; Saša Širca; Brankica Mravinac; Philippe Castagnone‑Sereno; Miroslav Plohl; Nevenka Meštrović. Satellitome analyses in nematodes illuminate complex species history and show conserved features in satellite DNAs. BMC Biology 2022, 20:259
Despot-Slade E, Mravinac B, Širca S, Castagnone-Sereno P, Plohl M, Meštrović N (2021) The centromere histone is conserved and associated with tandem repeats sharing a conserved 19-bp Box in the holocentromere of Meloidogyne nematodes. Molecular Biology and Evolution. 38:1943-1965.
Gržan T, Despot-Slade E, Meštrović N, Plohl M, Mravinac B (2020) CenH3 distribution reveals extended centromeres in the model beetle Tribolium castaneum. PLoS Genet. 16(10):e1009115.
Pavlek M, Gelfand Y, Plohl M, Meštrović N. (2015) Genome-wide analysis of tandem repeats in Tribolium castaneum genome reveals abundant and highly dynamic tandem repeat families with satellite DNA features in euchromatic chromosomal arms. DNA Research Dec;22(6):387-401
Paço A, Adega F, Meštrović N, Plohl M, Chaves R, (2014) Evolutionary story of a satellite DNA sequence from Phodopus sungorus (Rodentia, Cricetidae) Genome Biology and Evolution, 6; 2944-2955
Meštrović N*, Pavlek M, Car A, Castagnone-Sereno P, Abad P, Plohl M (2013) Conserved DNA Motifs, Including the CENP-B Box-like, Are Possible Promoters of Satellite DNA Array Rearrangements in Nematodes. PLOS ONE, 8 (6)
*first and corresponding author
Meštrović N, Plohl M, Castagnone-Sereno P (2009). Relevance of satellite DNA genomic distribution in phylogenetic analysis: a case study with root-knot nematodes of the genus Meloidogyne. Molecular Phylogenetics and Evolution. 50, 1; 204-208
Meštrović N, Castagnone-Sereno P, Plohl M (2006) Interplay of selective pressure and stochastic events directs evolution of the MEL172 satellite DNA library in root-knot nematodes. Molecular Biology and Evolution. 23, 12; 2316-2325
Meštrović N, Plohl M, Mravinac B, Ugarković Đ (1998) Evolution of satellite DNAs from the genus Palorus : experimental evidence for the library hypothesis. Molecular Biology and Evolution. 15 (1998) , 8; 1062-1068