Machine Learning, Faculty of Science, Department of Mathematics, Zagreb

1.1 Matija Piškorec, Nino Antulov-Fantulin, Petra Kralj Novak, Igor Mozetič, Miha Grčar, Irena Vodenska, T. Šmuc (2014), Cohesiveness in Financial News and its Relation to Market Volatility, Scientific Reports,  http://dx.doi.org/10.1038/srep05038.

1.2 N. Antulov-Fantulin, T. Šmuc, A. Lančić, H. Štefančić, M. Šikić, (2015) Identification of patient zero in static and temporal networks - robustness and limitations, Phys. Rev. Lett., 114(24), 248701.

1.3 M. Mihelčić, N. Lavrač, S. Džeroski, T. Šmuc, (2017) A framework for redescription set construction, Expert Systems With Applications 68 196–215. 

1.4 M. Mihelčić, S. Džeroski, N. Lavrač, T. Šmuc, (2017) Redescription mining augmented with random forest of predictive clustering trees, Journal of Intelligent Information Systems, 1-34. doi:10.1007/s10844-017-0448-5.

1.5 M. Mihelčić, G. Šimić, M. L. Babić, N. Lavrač, S. Džeroski, T. Šmuc (2017) Using redescription mining to relate clinical and biological characteristics of cognitively impaired and Alzheimer’s disease patients. PLOS ONE 12(10).

1.6   M. Mihelčić, T. Šmuc, (2018), Targeted and contextual redescription set exploration,  Machine Learning, https://doi.org/10.1007/s10994-018-5738-9

1.7   V., Vidulin, T. Šmuc, S. Džeroski, F. Supek, The evolutionary signal in metagenome phyletic
profiles predicts many gene functions, Microbiome  (2018) 6:129,          https://doi.org/10.1186/s40168-018-0506-4

1.8 V Vidulin, T Šmuc, F Supek, (2016). Extensive Complementarity between Gene Function Prediction Methods, Bioinformatics, 1367-4803.

1.9 M Brbić, M Piškorec, V Vidulin, A Kriško, T Šmuc and F Supek, (2016), The landscape of microbial phenotypic traits and associated genes, Nucleic acids research (0305-1048).

1.10P. Radivojac et al., (2013) A large-scale evaluation of computational protein function prediction; Nature Methods 10(3):221.

1.11Škunca N, Bošnjak M,  Kriško A, Panov P, Džeroski  S, Šmuc T, Supek F. (2012). Phyletic Profiling With Cliques of Orthologs Is Enhanced by Signatures of Paralogy  Relationships, PLoS Computational Biology.

1.12Supek F,  Bošnjak M, Škunca N, Šmuc T, (2011), REVIGO summarizes and visualizes long lists  of Gene Ontology  terms ,  PloS One,  (7):e21800. doi:10.1371/journal.pone.

Zbornik radova s konferencije

• Proceedings of the ECML-PKDD 2011 Workshop on Discovery Challenge / Šmuc, Tomislav ; Antulov-Fantulin, Nino ; Morzy, Mikołaj (ur.). Zagreb: Institut Ruđer Bošković, 2011

  ceur-ws.org

Izvorni znanstveni rad

• Mihelčić, Matej ; Šmuc, Tomislav | Rules, Subgroups and Redescriptions as Features in Classification Tasks // Machine Learning and Principles and Practice of Knowledge Discovery in Databases. International Workshops of ECML PKDD 2022.. | Cham: Springer, 2023. str. 248-260 . doi: 10.1007/978-3-031-23618-1_17

  doilink.springer.com

• Mihelčić, Matej ; Džeroski, Sašo ; Šmuc, Tomislav | Extending Redescription Mining to Multiple Views // 21st International Conference, DS 2018, Limassol, Cyprus, October 29–31, 2018, Proceedings. | Cham: Springer, 2018. str. 292-307 . doi: 10.1007/978-3-030-01771-2_19

  doilink.springer.com

• Supek, Fran ; Šmuc, Tomislav | Distance Measures and Machine Learning Approaches for Codon Usage Analyses // Codon Evolution - Mechanisms and Models. | Oxford: Oxford University Press, 2011. str. 229-244

  www.codonbook.comukcatalogue.oup.com

• Trontl, Krešimir ; Šmuc, Tomislav ; Pevec, Dubravko | Learning Support Vector Regression Models for Fast Radiation Dose Rate // Machine Learning Research Progress. | New York (NY): Nova Science Publishers, 2010. str. 427-462

• Kašner, M. ; Jelaković, Bojan ; Laganović, Mario ; Željković, T. ; Kuzmanić, Duško ; Boršo, Gordana ; Šmuc, Tomislav ; Gamberger, Dragan ; Rončević, P. | Serum uric-acid is related to metabolic disturbance and associated to serum aldosterone in essential hypertension // Frontiers in Coronary Artery Disease : Proceedings of the 5th International Congress on Coronary Artery Disease. | Bologna: Monduzzi Editore, 2003. str. 457-460

Stručni rad

• Mihelčić, Matej ; Bošnjak Matko ; Antulov-Fantulin Nino ; Šmuc Tomislav | Constructing Recommender Systems in RapidMiner // RapidMiner. | New York (NY): Chapman and Hall/CRC, 2013. str. 119-143 . doi: 10.1201/b16023

  doi

• Laganović, Mario ; Jelaković, Bojan ; Kuzmanić, Dušan ; Boršo, Gordana ; Rončević, Tomislav ; Vdović, M. ; Željković, T. ; Kašner, M. ; Šmuc, Tomislav ; Gamberger, Dragan | Low birth does not influence blood pressure through reduced kidney volume // Frontiers in Coronary Artery Disease : Proceedings of the 5th International Congress on Coronary Artery Disease. | Bologna: Monduzzi Editore, 2003. str. 461-468

Izvorni znanstveni rad

• Fernandes, Sofia ; Fanaee‑T, Hadi ; Gama, João ; Tišljarić, Leo ; Šmuc, Tomislav | WINTENDED: WINdowed TENsor decomposition for Densification Event Detection in time-evolving networks // Machine learning, 112 (2023), 2; 459-481. doi: 10.1007/s10994-021-05979-8

  doilink.springer.com

• Mihelčić, Matej ; Šmuc, Tomislav | Approaches for Multi-View Redescription Mining // IEEE access, 9 (2021), 19356-19378. doi: 10.1109/access.2021.3054245

  doiieeexplore.ieee.orgieeexplore.ieee.orgfulir.irb.hr

• Jović, Ozren ; Šmuc, Tomislav | Search for Novel Lead Inhibitors of Yeast Cytochrome bc1, from Drugbank and COCONUT // Molecules, 26 (2021), 14; 4323, 21. doi: 10.3390/molecules26144323

  doiwww.mdpi.comdoi.orgfulir.irb.hrfulir.irb.hr

• Vlainić, Josipa ; Jović, Ozren ; Kosalec, Ivan ; Vugrek, Oliver ; Čoz-Rakovac, Rozelindra ; Šmuc, Tomislav | In Vitro Confirmation of Siramesine as a Novel Antifungal Agent with In Silico Lead Proposals of Structurally Related Antifungals // Molecules, 26 (2021), 12; 3504, 17. doi: 10.3390/molecules26123504

  doiwww.mdpi.comfulir.irb.hr

• Matulja, Dario ; Grbčić, Petra ; Bojanić, Krunoslav ; Topić-Popović, Natalija ; Čož-Rakovac, Rozelindra ; Laclef, Sylvain ; Šmuc, Tomislav ; Jović, Ozren ; Marković, Dean ; Pavelić Kraljević, Sandra | Chemical Evaluation, Antioxidant, Antiproliferative, Anti-Inflammatory and Antibacterial Activities of Organic Extract and Semi-Purified Fractions of the Adriatic Sea Fan, Eunicella cavolini // Molecules, 26 (2021), 19; 5751, 21. doi: 10.3390/molecules26195751

  doiwww.mdpi.comfulir.irb.hrdoi.org

• Cichońska, Anna ; Ravikumar, Balaguru ; Allaway, Robert J. ; Wan, Fangping ; Park, Sungjoon ; Isayev, Olexandr ; Li, Shuya ; Mason, Michael ; Lamb, Andrew ; Tanoli, Ziaurrehman et al. | Crowdsourced mapping of unexplored target space of kinase inhibitors // Nature communications, 12 (2021), 3307, 18. doi: 10.1038/s41467-021-23165-1

  doiwww.nature.comdoi.orgfulir.irb.hr

• Oršolić, Davor ; Pehar, Vesna ; Šmuc, Tomislav ; Stepanić, Višnja | Comprehensive machine learning based study of the chemical space of herbicides // Scientific reports, 11 (2021), 11479, 12. doi: 10.1038/s41598-021-90690-w

  doiwww.nature.comdoi.orgfulir.irb.hr

• Kulikovskikh, Ilona ; Lipić, Tomislav ; Šmuc, Tomislav | From Knowledge Transmission to Knowledge Construction: A Step towards Human-Like Active Learning // Entropy (Basel. Online), 22 (2020), 8; 906, 11. doi: 10.3390/e22080906

  doiwww.mdpi.comfulir.irb.hr

• Jović, Ozren ; Šmuc, Tomislav | Combined Machine Learning and Molecular Modelling Workflow for the Recognition of Potentially Novel Fungicides // Molecules, 25 (2020), 9; 2198, 24. doi: 10.3390/molecules25092198

  doiwww.mdpi.comfulir.irb.hr

• Zhou, Naihui ; Jiang, Yuxiang ; Bergquist, Timothy R. ; Lee, Alexandra J. ; Kacsoh, Balint Z. ; Crocker, Alex W. ; Lewis, Kimberley A. ; Georghiou, George ; Nguyen, Huy N. ; Hamid, Md Nafiz et al. | The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens // Genome biology, 20 (2019), 1; 244, 23. doi: 10.1186/s13059-019-1835-8

  doigenomebiology.biomedcentral.com

• Kulikovskikh, Ilona ; Prokhorov, Sergej ; Lipić, Tomislav ; Legović, Tarzan ; Šmuc, Tomislav | BioGD: Bio-inspired robust gradient descent // PLoS One, 14 (2019), 7; e0219004, 19. doi: 10.1371/journal.pone.0219004

  doijournals.plos.org

• Piškorec, Matija ; Šmuc, Tomislav ; Šikić, Mile | Disentangling Sources of Influence in Online Social Networks // IEEE access, 7 (2019), 131692-131704. doi: 10.1109/access.2019.2940762

  doiieeexplore.ieee.orgdoi.orgfulir.irb.hr

• Mihelčić, Matej ; Šmuc, Tomislav ; Supek, Fran | Patterns of diverse gene functions in genomic neighborhoods predict gene function and phenotype // Scientific reports, 9 (2019), 1; 19537, 16. doi: 10.1038/s41598-019-55984-0

  doiwww.biorxiv.orgwww.nature.com

• Mihelčić, Matej ; Šmuc, Tomislav | Targeted and contextual redescription set exploration // Machine learning, 107 (2018), 11; 1809-1846. doi: 10.1007/s10994-018-5738-9

  doilink.springer.com

• Vidulin, Vedrana ; Šmuc, Tomislav ; Džeroski, Sašo ; Supek, Fran | The evolutionary signal in metagenome phyletic profiles predicts many gene functions // Microbiome, 6 (2018), 1; 129, 21. doi: 10.1186/s40168-018-0506-4

  doimicrobiomejournal.biomedcentral.comlink.springer.com

• Mihelčić, Matej ; Džeroski, Sašo ; Lavrač, Nada ; Šmuc, Tomislav | Redescription mining augmented with random forest of multi-target predictive clustering trees // Journal of intelligent information systems, 50 (2018), 1; 63-96. doi: 10.1007/s10844-017-0448-5

  doilink.springer.com

• (Alzheimer’s Disease Neuroimaging Initiative) Mihelčić, Matej ; Šimić, Goran ; Babić Leko, Mirjana ; Lavrač, Nada ; Džeroski, Sašo ; Šmuc, Tomislav | Using redescription mining to relate clinical and biological characteristics of cognitively impaired and Alzheimer's disease patients // PLoS One, 12 (2017), 10; 1-35. doi: 10.1371/journal.pone.0187364

  doijournals.plos.org

• Mihelčić, Matej ; Džeroski, Sašo ; Lavrač, Nada ; Šmuc, Tomislav | A framework for redescription set construction // Expert systems with applications, 68 (2017), 196-215. doi: 10.1016/j.eswa.2016.10.012

  doiwww.sciencedirect.com

• Brbić, Maria ; Piškorec, Matija ; Vidulin, Vedrana ; Kriško, Anita ; Šmuc, Tomislav ; Supek, Fran | The landscape of microbial phenotypic traits and associated genes // Nucleic acids research, 44 (2016), 21; 10074-10090. doi: 10.1093/nar/gkw964

  doinar.oxfordjournals.orgdoi.org

• Vidulin, Vedrana ; Šmuc, Tomislav ; Supek, Fran | Extensive Complementarity between Gene Function Prediction Methods // Bioinformatics, 32 (2016), 23; 3645-3653. doi: 10.1093/bioinformatics/btw532

  doibioinformatics.oxfordjournals.org

• Antulov-Fantulin, Nino ; Lančić, Alen ; Šmuc, Tomislav ; Štefančić, Hrvoje ; Šikić, Mile | Identification of Patient Zero in Static and Temporal Networks : Robustness and Limitations // Physical review letters, 114 (2015), 248701-1-248701-5. doi: 10.1103/PhysRevLett.114.248701

  doijournals.aps.orgdx.doi.org

• Piškorec, Matija ; Antulov-Fantulin, Nino ; Kralj Novak, Petra ; Mozetič, Igor ; Grčar, Miha ; Vodenska, Irena ; Šmuc Tomislav | Cohesiveness in Financial News and its Relation to Market Volatility // Scientific reports, 4 (2014), 5038-1-5038-8. doi: 10.1038/srep05038

  doiwww.nature.com

• Šimpraga, Miljenko ; Šmuc, Tomislav ; Matanović, Krešimir ; Radin, Lada ; Shek-Vugrovečki, Ana ; Ljubičić, Iva ; Vojta, Aleksandar | Reference intervals for organically raised sheep: Effects of breed, location and season on hematological and biochemical parameters // Small ruminant research, 112 (2013), 1-3; 1-6. doi: 10.1016/j.smallrumres.2012.11.032

  doidx.doi.orgwww.sciencedirect.com

• Levatić, Jurica ; Džeroski, Sašo ; Supek, Fran ; Šmuc, Tomislav. | Semi-Supervised Learning for Quantitative Structure- Activity Modeling // Informatica (Ljubljana), 37 (2013), 2; 173-179

  www.informatica.sifulir.irb.hr

• Radivojac, Predrag ; ... ; Škunca, Nives ; Supek, Fran ; Bošnjak, Matko ; ... ; Šmuc, Tomislav ; ... ; Friedberg, Iddo | A large-scale evaluation of computational protein function prediction // Nature methods, 10 (2013), 3; 221-227. doi: 10.1038/nmeth.2340

  doiwww.nature.com

• Gamberger, Dragan ; Šmuc, Tomislav | Good Governance Problems and Recent Financial Crises in Some EU Countries // Economics : The Open Access Open-Assessment E-Journal, 7 (2013), 201341, 21. doi: 10.5018/economics-ejournal.ja.2013-41

  doiwww.economics-ejournal.orgfulir.irb.hr

• Levatić, Jurica ; Ćurak, Jasna ; Kralj, Marijeta ; Šmuc, Tomislav ; Osmak, Maja ; Supek, Fran | Accurate Models for P-gp Drug Recognition Induced from a Cancer Cell Line Cytotoxicity Screen // Journal of medicinal chemistry, 56 (2013), 14; 5691-5708. doi: 10.1021/jm400328s

  doipubs.acs.org

• Škunca, Nives ; Bošnjak, Matko ; Kriško, Anita ; Panov, Panče ; Džeroski, Sašo ; Šmuc, Tomislav ; Supek, Fran | Phyletic Profiling With Cliques of Orthologs is Enhanced by Signatures of Paralogy Relationships // Plos computational biology, 9 (2012), 1; e100285, 14. doi: 10.1371/journal.pcbi.1002852

  doigorbi.irb.hrjournals.plos.orgfulir.irb.hr

• Ester, Katja ; Supek, Fran ; Majsec, Kristina ; Marjanović, Marko ; Lembo, David ; Donalisio, Manuela ; Šmuc, Tomislav ; Jarak, Ivana ; Karminski-Zamola, Grace ; Kralj, Marijeta | Putative mechanisms of antitumor activity of cyano-substituted heteroaryles in HeLa cells // Investigational new drugs, 30 (2012), 2; 450-467. doi: 10.1007/s10637-010-9571-7

  doiwww.springerlink.com

• Rios-Morales, Ruth ; Gamberger, Dragan ; Jenkins, Ian ; Šmuc, Tomislav ; | Modelling investment in the tourism industry using the World Bank's good governance indicators // Journal of modelling in management, 6 (2011), 3; 279-296. doi: 10.1108/17465661111183694

  doiwww.emeraldinsight.com

• Supek, Fran ; Bošnjak, Matko ; Škunca, Nives ; Šmuc, Tomislav | REVIGO summarizes and visualizes long lists of Gene Ontology terms // PLoS One, 6 (2011), 7; e21800-e21800. doi: 10.1371/journal.pone.0021800

  doiwww.plosone.orgfulir.irb.hr

• Smole, Zlatko ; Nikolić, Nela ; Supek, Fran ; Šmuc, Tomislav ; Sbalzarini, Ivo ; Kriško, Anita | Proteome sequence features carry signatures of the environmental niche of prokaryotes // Bmc evolutionary biology, 11 (2011), 26, 10. doi: 10.1186/1471-2148-11-26

  doiwww.ncbi.nlm.nih.govwww.biomedcentral.comdoi.org

• Supek, Fran ; Šumanovac Ramljak, Tatjana ; Marjanović, Marko ; Buljubašić, Maja ; Kragol, Goran ; Ilić, Nataša ; Šmuc, Tomislav ; Zahradka, Davor ; Mlinarić-Majerski, Kata ; Kralj, Marijeta | Could LogP be a principal determinant of biological activity in 18-crown-6 ethers? Synthesis of biologically active adamantane-substituted diaza-crowns // European journal of medicinal chemistry, 46 (2011), 8; 3444-3454. doi: 10.1016/j.ejmech.2011.05.009

  doiwww.ncbi.nlm.nih.govwww.sciencedirect.comdx.doi.org

• Čož-Rakovac, Rozelinda ; Lisičić, Duje ; Šmuc, Tomislav ; Topić Popović, Natalija ; Strunjak-Perović, Ivančica ; Jadan, Margita ; Tadić, Zoran ; Jug Dujaković, Jurica | Classification Modelling of Physiological Stages in Captive Balkan Whip Snakes Using Blood Biochemistry Parameters // Journal of herpetology, 45 (2011), 4; 525-529

  www.bioone.orgdx.doi.org

• Gredičak, Matija ; Supek, Fran ; Kralj, Marijeta, Majer, Zsuzsa ; Hollosi, Miklos ; Šmuc, Tomislav ; Mlinarić-Majerski, Kata ; Horvat, Štefica | Computational structure-activity study directs synthesis of novel antitumor enkephalin analogs // Amino acids (Wien), 38 (2010), 4; 1185-1191. doi: 10.1007/s00726-009-0329-5

  doiwww.springerlink.comdoi.org

• Supek, Fran ; Šmuc, Tomislav | On Relevance of Codon Usage to Expression of Synthetic and Natural Genes in Escherichia coli // Genetics, 185 (2010), 1129-1134. doi: 10.1534/genetics.110.115477

  doiwww.genetics.orgwww.genetics.org

• Supek, Fran ; Škunca, Nives ; Repar, Jelena ; Vlahoviček, Kristian ; Šmuc, Tomislav | Translational Selection Is Ubiquitous in Prokaryotes // PLOS genetics, 6 (2010), 6; e1001004, 13. doi: 10.1371/journal.pgen.1001004

  doiwww.plosgenetics.orgjournals.plos.org

• Budimir, Ana ; Šmuc, Tomislav ; Weitner, Tin ; Batinić-Haberle, Ines ; Biruš, Mladen | Thermodynamics and electrochemistry of manganese ortho-tetrakis(N-n-butylpyridinium-2-yl)porphyrin in aqueous solutions // Journal of coordination chemistry, 63 (2010), 14/16; 2750-2765. doi: 10.1080/00958972.2010.502571

  doiwww.tandfonline.com

• Čož-Rakovac, Rozelinda ; Topić Popović, Natalija ; Šmuc, Tomislav ; Strunjak-Perović, Ivančica ; Jadan, Margita | Classification accuracy of algorithms for blood chemistry data of three aquaculture-influenced marine fish species // Fish physiology and biochemistry, 35 (2009), 4; 641-647. doi: 10.1007/s10695-008-9288-0

  doiwww.springerlink.com

• Rios-Morales, Ruth ; Gamberger, Dragan ; Šmuc, Tomislav ; Azuaje, Francisco | Innovative methods in assessing political risk for business internationalization // Research in international business and finance, 23 (2009), 144-156. doi: 10.1016/j.ribaf.2008.03.011

  doiwww.sciencedirect.comdoi.org

• Supek, Fran ; Peharec, Petra ; Krsnik-Rasol, Marijana ; Šmuc, Tomislav | Enhanced analytical power of SDS-PAGE using machine learning algorithms // Proteomics, 8 (2008), 1; 28-31. doi: 10.1002/pmic.200700555

  doiwww.ncbi.nlm.nih.govonlinelibrary.wiley.com

• Čož-Rakovac, Rozelinda ; Šmuc, Tomislav ; Topić Popović, Natalija ; Strunjak-Perović, Ivančica ; Hacmanjek, Mato ; Jadan, Margita | Novel methods for assesing fish blood biochemical data // Journal of applied ichthyology, 24 (2008), 1; 77-80. doi: 10.1111/j.1439-0426.2007.01041.x

  doionlinelibrary.wiley.com

• Čož-Rakovac, Rozelinda ; Strunjak-Perović, Ivančica ; Topić Popović, Natalija ; Hacmanjek, Mato ; Šmuc, Tomislav ; Jadan, Margita ; Lipej, Zoran ; Homen, Zlatko | Cage culture effects on mullets (Mugilidae) liver histology and blood chemistry profile // Journal of fish biology, 72 (2008), 10; 2557-2569. doi: 10.1111/j.1095-8649.2008.01865.x

  doionlinelibrary.wiley.com

• Trontl, Krešimir ; Pevec, Dubravko ; Šmuc, Tomislav | Machine learning of the reactor core loading pattern critical parameters // Science and technology of nuclear installations, 2008 (2008), 695153, 7. doi: 10.1155/2008/695153

  doiwww.hindawi.comfulir.irb.hr

• Supek, Fran ; Kralj, Marijeta ; Marjanović, Marko ; Šuman, Lidija ; Šmuc, Tomislav ; Krizmanić, Irena ; Žinić, Biserka | Atypical cytostatic mechanism of N -1-sulfonylcytosine derivatives determined by in vitro screening and computational analysis // Investigational new drugs, 26 (2008), 2; 97-110. doi: 10.1007/s10637-007-9084-1

  doilink.springer.com

• Krstačić, Goran ; Gamberger, Dragan ; Krstačić, Antonija ; Šmuc, Tomislav ; Miličić, Davor | The Chaos Theory and Non-linear Dynamics in Heart Rate Variability in Patients with Heart Failure // Computers in cardiology, 35 (2008), 957-959

  cinc.mit.edu

• Malenica, Mislav ; Šmuc, Tomislav ; Šnajder, Jan ; Dalbelo Bašić, Bojana | Language Morphology Offset: Text Classification on a Croatian-English Parallel Corpus // Information processing & management, 44 (2008), 1; 325-339. doi: 10.1016/j.ipm.2006.12.007

  doiwww.sciencedirect.com

• Trontl, Krešimir ; Šmuc, Tomislav ; Pevec, Dubravko | Support vector regression model for the estimation of γ -ray buildup factors for multi-layer shields // Annals of nuclear energy, 34 (2007), 12; 939-952-x

  dx.doi.org

• Marjanović, Marko ; Kralj, Marijeta ; Supek, Fran ; Frkanec, Leo ; Piantanida, Ivo ; Šmuc, Tomislav ; Tušek-Božić, Ljerka | Antitumor potential of crown ethers: structure activity relationships, cell cycle disturbances and cell death studies of a series of ionophores // Journal of medicinal chemistry, 50 (2007), 5; 1007-1018. doi: 10.1021/jm061162u

  doipubs.acs.org

• Jelaković, Bojan ; Dika, Živka ; Kos, Jelena ; Pećin, Ivan ; Laganović, Mario ; Jovanović, Aleksandar ; Šmuc, Tomislav ; Gamberger, Dragan ; Kuzmanić, Duško | Liječenje i kontrola arterijske hipertenzije u Hrvatskoj. BEL-AH istraživanje // Liječnički vjesnik : glasilo Hrvatskoga liječničkog zbora, 128 (2006), 11-12; 329-333

  lijecnicki-vjesnik.hlz.hr

• Supek, Fran ; Šmuc, Tomislav ; Lučić, Bono | A prototype structure-activity relationship model based on National Cancer Institute cell line screening data // Periodicum biologorum, 107 (2005), 4; 451-455-x

• Marić, Ivan ; Galović, Antun ; Šmuc, Tomislav | Calculation of natural gas isentropic exponent // Flow measurement and instrumentation, 16 (2005), 1; 13-20-x

• Pavlović, Mladen ; Šantić, Branko ; Desnica-Franković, Dunja Ida ; Radić, Nikola ; Šmuc, Tomislav ; Desnica, Uroš V. | The Impact of Deep Levels on Photocurrent Transients in Semi-Insulating GaAs // Journal of Electronic Materials, 32 (2003), 10; 1100-1106. doi: 10.1007/s11664-003-0094-2

  doi

• Krstačić, Goran ; Gambberger, Dragan ; Šmuc, Tomislav ; Krstačić, Antonija | Some R-R interval based paroxysmal atrial fibrillation predictors // Computers in cardiology, 28 (2001), 409-412

• Grošev, Darko ; Medvedec, Mario ; Lončarić, Srećko ; Žuvić, Marijan ; Dodig, Damir ; Šmuc, Tomislav | Determination of small objects from pinhole scintigrams // Nuclear medicine communications, 19 (1998), 7; 679-688

Stručni rad

• Jelaković, B ; Željković-Vrkić, T ; Pećin, I ; Dika, Ž ; Jovanović, A ; Podobnik, D ; Šmuc, T ; Gamberger, D ; Katić, K ; Kašner, M et al. | Arterial hypertension in Croatia - EH-UH study results // Acta medica Croatica, 61 (2007), 287-292

Pregledni rad (stručni)

• Ahel, Marijan ; Antičić, Tome ; Balog, Tihomir ; Bilić, Nevenko ; Guberina, Branko ; Katušić Hećimović, Silva ; Jerić, Ivanka ; Klanjšček, Tin ; Legović, Tarzan ; Musić, Svetozar et al. | The Ruder Boskovic Institute – Today and Tomorrow // Periodicum biologorum, 112 (2010), 4; 369-374

  hrcak.srce.hr

Izvorni znanstveni rad

• Šmuc, Tomislav | Improving Convergence Properties of the Differential Evolution Algorithm // Proceedings of the MENDEL 2002 - 8th International Conference on Soft Computing. | Brno, 2002. str. 80-86-x

• Šmuc, Tomislav | Sensitivity of Differential Evolution Algorithm to Values of Control Parameters // Proceedings of the International Conference on Artificial Intelligence. | CSREA Press, 2002. str. 1087-1093-x

• Šmuc, Tomislav ; Marić, Ivan ; Bosanac, Gordan ; Gamberger, Dragan ; Bogunović, Nikola ; Krstačić, Goran | Dynamic Features of the Normal Heart Rate Variability // Proceedings of International Conference Computers in Cardiology 2002. | Institute of Electrical and Electronics Engineers (IEEE), 2002. str. 241-244. doi: 10.1109/CIC.2002.1166752

  doiieeexplore.ieee.org

• Šmuc, Tomislav ; Gamberger, Dragan ; Krstačić, Goran | Combining unsupervised and supervised machine learning in analysis of the CHD patient database // 8th Conference on Artificial Intelligence in Medicine in Europe. | Berlin: Springer, 2001. str. 109-112-x

• Krstačić, Goran ; Gamberger, Dragan ; Šmuc, Tomislav | Coronary heart disease patient models based on inductive machine learning // 8th Conference on Artificial Intelligence in Medicine in Europe. | Berlin: Springer, 2001. str. 113-116-x

• Pevec, Dubravko ; Grgić, Davor ; Ječmenica, Radomir ; Trontl, Krešimir ; Gergeta, Kristijan ; Šmuc, Tomislav | Upgrade of the FUMACS Code Package // Proceedings of the International Conference Nuclear Energy in Central Europe 2001. | 2001

• Pevec, Dubravko ; Šmuc, Tomislav | Investigating a Possibility to Extend an Operating Cycle Length of NPP Krško // Operating Cycle Extension of Nuclear Power Plants, Proceeedings of a Technical Committee Meeting. | Beč: International Atomic Energy Agency (IAEA), 2000. str. 15-24-x

• Baće, Mile ; Trontl, Krešimir ; Šmuc, Tomislav | Double Tiering as an Option for Spent Fuel Pool Capacity Increase // Proceedings of the International Conference Nuclear Energy in Central Europe 2000. | Ljubljana: Nuclear Society of Slovenia, 2000. str. 105-112-x

• Baće, Mile ; Trontl, Krešimir ; Šmuc, Tomislav | Double tiering as an option for spent fuel pool capacity increase // Proceedings of the International Conference Nuclear Energy in Central Europe 2000. | Ljubljana: NSS, 2000. str. 105.1-105.8

• Baće, Mile ; Ječmenica, Radomir ; Šmuc, Tomislav | Radiological shielding analysis of special building for the old NPP Krško steam generators // Proceedings International Conference "Nuclear Option in Countries with Small and Medium Electricity Grids" / Knapp, Vladimir ; Čavlina, Nikola (ur.). | Zagreb: Hrvatsko nuklearno društvo, 2000. str. 431-438

  inis.iaea.org

• Šmuc, Tomislav ; de Leege, P.F.A. | Improved Cross-Section Homogenisation for Research Reactor Criticality Calculations // Proceedings of The Sixth Int. Conf. on Nuclear Criticality Safety. | Pariz, 1999. str. 262-268-x

• Baće, Mile ; Ječmenica, Radomir ; Šmuc, Tomislav | Validation of SCALE Code Package on High Performance Neutron Shields // International Conference: Nuclear Energy in Central Europe '99, Proceedings, Volume 1. | Ljubljana: Nuclear Society of Slovenia, 1999. str. 75-81-x

• Šmuc, Tomislav ; de Leege P.F.A., Kloosterman J.L. | Demonstration of the Compact Depletion Models for Burnup Calculations // Proceedings of the Int. Conf. on Mathematics and Computation, Reactor Physics and Environmental Analysis in Nuclear Applications. | Madrid: Senda Editorial,S.A., 1999. str. 1901-1911-x

• Šmuc, Tomislav ; Bogunović, Nikola ; Šarić, Davor | Evolutionary Algorithm for Steiner Tree Optimization // Proc. of the 21st Int. Conf. ITI'99 - Information Technology Interfaces. | Zagreb: Fakultet elektrotehnike i računarstva Sveučilišta u Zagrebu, 1999. str. 425-432

• Bogunović, Nikola ; Šmuc, Tomislav | Comparison of Methods for Reduction of Computational Complexity in Bayesian Networks // Computers in Intelligent Systems. | Rijeka: Hrvatska udruga za informacijsku i komunikacijsku tehnologiju, elektroniku i mikroelektroniku - MIPRO, 1999. str. 17-20

• Šmuc, Tomislav ; Pevec, Dubravko ; Bilić, Tea | Equilibrium Cycles of NPP Krško after Power Uprate // International Conference: Nuclear Option in Countries with Small and Medium Electricity Grids, Conference Proceedings. | Zagreb: Hrvatsko nuklearno društvo, 1998. str. 211-218-x

• Šmuc, Tomislav ; Ječmenica, Radomir ; Trontl, Krešimir | Validation of QAD-CGGP for Shielding Analyses of Intermediate and Low Level Waste Drums // International Conference Nuclear Option in Countries with Small and Medium Electricity Grids : Conference Proceedings. | Zagreb: Hrvatsko nuklearno društvo, 1998. str. 456-463

• Baće, Mile ; Pevec, Dubravko ; Šmuc, Tomislav | Reracking Possibilities of the NPP Krško Spent Fuel Pool // International Conference: Nuclear Option in Countries with Small and Medium Electricity Grids, Conference Proceedings. | Zagreb: Hrvatsko nuklearno društvo, 1998. str. 365-371-x

• Bilić, Tea ; Pevec, Dubravko ; Šmuc, Tomislav | Investigating a possibility to implement 24-month cycle in NPP Krško // Nuclear Energy in Central Europe '98, Proceedings. | Ljubljana: Nuclear Society of Slovenia, 1998. str. 107-113-x

• Trontl, Krešimir ; Baće, Mile ; Šmuc, Tomislav | Incorporation of multi-layer option into QAD-CGGP code // Nuclear Energy in Central Europe '98, Proceedings. | Ljubljana: Nuclear Society of Slovenia, 1998. str. 139-146-x

• Baće, Mile ; Pevec, Dubravko ; Šmuc, Tomislav | Reracking Possibilities of the NPP Krško Spent Fuel Pool // Proceedings of the International Conference: Nuclear Option in Countries with Small and Medium Energy Grid. | Zagreb: Hrvatsko nuklearno društvo, 1998. str. 365-371

• Šmuc, Tomislav ; Pevec, Dubravko ; Bilić, Tea | Equilibrium cycles of NPP Krško after power uprate // Proceedings of the International Conference: Nuclear Option in Countries with Small and Medium Grid. | Zagreb: Hrvatsko nuklearno društvo, 1998. str. 211-218

• Trontl, Krešimir ; Baće, Mile ; Šmuc, Tomislav | Incorporation of multi-layer option into QAD-CGGP code // Proceedings of the 5th Regional Meeting : Nuclear Energy in Central Europe. | Ljubljana: Nuclear Society of Slovenia, 1998. str. 139-146-x

• Bilić, Tea ; Pevec, Dubravko ; Šmuc, Tomislav | Investigating a possibility to implement 24-month cycle in NPP Krško // Proceedings of the 5th Regional Meeting : Nuclear Energy in Central Europe. | Ljubljana: Nuclear Society of Slovenia, 1998. str. 107-114

• Baće, Mile ; Pevec, Dubravko ; Šmuc, Tomislav | Impact of burnup credit on the NPP Krško spent fuel pool criticality // Proceedings of the 4th Regional Meeting : Nuclear Energy in Central Europe. | Ljubljana: Nuclear Society of Slovenia, 1997. str. 1-7

• Baće, Mile ; Pevec, Dubravko ; Šmuc, Tomislav | Impact of Burnup on the NPP Krško Spent Fuel Pool Criticality // Proceedings of 4th Regional Meeting Nuclear Energy in Central Europe. | Nuclear Society of Slovenia, 1997. str. 331-337-x

• Bernnat, Wolfgang ; Lutz, Dietrich ; Pevec, Dubravko ; Šmuc, Tomislav | Generation of group constants for NPP Krško using RSYST code package // Proceedings of International Conference : Nuclear Option in Countries with Small and Medium Electricity Grid. | Zagreb: Hrvatsko nuklearno društvo, 1996. str. 463-470

Ostalo

• Gamberger, Dragan ; Krstačić, Goran ; Šmuc, Tomislav | Medical expert evaluation of machine learning results for a coronary heart disease database // Medical Data Analysis. | Berlin: Springer, 2000. str. 159-168-x

• Gamberger, Dragan ; Lavrač, Nada ; Krstačić, Goran ; Šmuc, Tomislav | Inconsistency tests for patient records in a coronary heart disease database // Medical Data Analysis. | Berlin: Springer, 2000. str. 183-189-x

Sažetak izlaganja sa skupa

• Desnica, Uroš ; Šantić, Branko ; Pavlović, Mladen ; Desnica-Franković, Ida Dunja ; Radić, Nikola ; Šmuc, Tomislav ; Petrović, Bojan | Defekti s dubokim novoima i foto-električka svojstva GaAs // Knjiga sažetaka 2. znanstvenog sastanka Hrvatskog fizikalnog društva. | Zagreb: Hrvatsko fizikalno društvo, 1999. str. 14-14-x

Sažetak izlaganja sa skupa

• Jelaković, Bojan ; Željković-Vrkić, T. ; Pećin, I. ; Jovanović, Aleksandar ; Podobnik, D. ; Šmuc, Tomislav ; Gamberger, Dragan ; Laganović, Mario ; Dika, Živka ; Boršo, Gordana et al. | Epidemiology of hypertension in Croatia. EHUH study // Journal of hypertension. Supplement, 2006. str. 242-242

• Jelaković, Bojan ; Pećin, I. ; Željković-Vrkić, T. ; Dika, Živka ; Laganović, Mario ; Kos, Josip ; Jovanović, Aleksandar ; Boršo, Gordana ; Kuzmanic, Duško ; Šmuc, Tomislav | Education and income as determinants for blood pressure value and hypertension prevalence in Croatia. EHUH study results // Journal of hypertension. Supplement, 2006. str. 347-347

Izvorni znanstveni rad

• Piškorec, Matija ; Antulov-Fantulin, Nino ; Miholić, Iva ; Šmuc, Tomislav ; Šikić, Mile | Modeling Peer and External Influence in Online Social Networks: Case of 2013 Referendum in Croatia // Studies in computational intelligence, 2017. str. 1015-1027. doi: 10.1007/978-3-319-72150-7_82

  doi

Neobjavljeni prilog sa skupa

• Hršak, Dalibor;Grubišić, Ivan; Novak, Jurica; Punčec, Marina; Šmuc, Tomislav; Stepanić, Višnja | Assessment of the contrastive learning approach to the out of distribution problem in the DREAM Target 2035 Challenge // MAINFRAME Symposium on AI-Driven Small-Molecule Drug Discovery | Barcelona, Španjolska, 18.03.2026-19.03.2026

  event.fourwaves.com

• Fumić, Barbara; Bujak, Maro; Šmuc, Tomislav; Bojanić, Krunoslav; Topić Popović, Natalija; Čož-Rakovac, Rozelinda; Roje, Marin | Identification of polyphenols in samples of nine different plant species (lavender, immortelle, winter savory and 6 types of basil) // 16th World Congress on Polyphenols Applications | Attard, Malta, 28.09.2023-29.09.2023

• Babić, Sanja; Begić, Karolina; Čižmek, Lara; Ul’yanovskii, NIkolay V; Kosyakov, Dmitry S; Cikoš, Anamarija; Jokić, Stela; Strunjak-Perović, Ivančica; Topić Popović, Natalija; Šmuc, Tomislav et al. | Pigments and its derivatives: Unlocking the biological potential of macroalga Cystoseira compressa // XIII ECMNP European Conference on Marine Natural Products | Granada, Španjolska, 03.09.2023-08.09.2023

• Stepanić, Višnja ; Oršolić, Davor ; Šmuc, Tomislav | Machine learning in chemical compound space // Mini-simpozij Hrvatskog kemijskog društva Rijeka 2022. | Rijeka, Hrvatska, 04.07.2022-04.07.2022

  www.biotech.uniri.hr

• Čož-Rakovac, Rozelinda ; Babić, Sanja ; Topić Popović, Natalija ; Šmuc, Tomislav | Determination of bioactive potential of brown alga Padina pavonica from the Adriatic Sea // XX International Symposium on Fish Nutrition and Feeding Towards Precision Fish Nutrition and Feeding (ISFNF) | Sorrento, Italija, 05.06.2022-09.06.2022

• Oršolić, Davor ; Lučić, Bono ; Stepanić, Višnja ; Šmuc, Tomislav | Prediction of Drug-Kinase Binding Affinities with Focus on Conserved Protein Kinase Domain // ISMB/ECCB 2021 (29th Annual Conference) | Virtual Event, 25.07.2021-30.07.2021

• Grubišić, Ivan ; Lipić, Tomislav ; Mesić, Benjamin ; Šmuc, Tomislav | BricksND - Benchmark for disentangled concept learning // 5th International Workshop on Data Science (IWDS 2020) | Zagreb, Hrvatska, 24.11.2020-24.11.2020

  fulir.irb.hrfulir.irb.hrfulir.irb.hr

Doktorski rad

• Piškorec, Matija | Statistical inference of exogenous and endogenous information propagation in social networks / Šikić, Mile ; Šmuc, Tomislav (mentor). | Zagreb, Fakultet elektrotehnike i računarstva, 2019

  urn.nsk.hr

• Antulov-Fantulin, Nino | Statistical inference algorithms for epidemic processes on complex networks / Šikić, Mile ; Šmuc, Tomislav (mentor). | Zagreb, Fakultet elektrotehnike i računarstva, 2015

• Supek, Fran | Detecting natural selection for translational efficiency in bacterial and archaeal genomes: a machine learning approach / Šmuc, Tomislav (mentor). | Zagreb, Prirodoslovno-matematički fakultet, Zagreb, 2010

• Trontl, Krešimir | Primjena regresijskog modela s potpornim vektorima u proračunu reaktorskog štita / Pevec, Dubravko ; Šmuc, Tomislav (mentor). | Zagreb, Fakultet elektrotehnike i računarstva, 2008

Elaborat/studija

• Pevec, Dubravko ; Šmuc, Tomislav ; Grgić, Davor ; Trontl, Krešimir ; Ječmenica, Radomir ; Gergeta, Kristijan ; Matijević, Mario | Upgrade of FUMACS Code Package for Modeling of NGF and Gadolinium, Final Report, 2009

• Stojanovski, Jadranka ; Zorc, Hrvoje ; Pećar-Ilić, Jadranka ; Šmuc, Tomislav ; Bronić, Josip ; Pintar, Ivan ; Skala, Karolj | Strategija razvoja mrežnih stranica Instituta Ruđer Bošković // interni dokument IRB, 2002

• Pevec, Dubravko ; Baće, Mile ; Ječmenica, Radomir ; Trontl, Krešimir ; Šmuc, Tomislav ; Grgić, Davor | Modernizacija paketa računalskih programa FUMACS, 2000

• Pevec, Dubravko ; Šmuc, Tomislav ; Urli, Natko | Gospodarenje gorivom u jezgri reaktora NE Krško u uvjetima predviđenog povećanja snage reaktora nakon zamjene parogeneratora // Gospodarenje gorivom u jezgri reaktora NE Krško u uvjetima predviđenog povećanja snage reaktora nakon zamjene parogeneratora, 1998

• Pevec, Dubravko ; Šmuc, Tomislav ; Urli, Natko | Analiza moderatorskog temperaturnog koeficijenta jezgre NE Krško u uvjetima povećanja snage // Analiza moderatorskog temperaturnog koeficijenta jezgre NE Krško u uvjetima povećanja snage, 1998

• Pevec, Dubravko ; Baće, Mile ; Šmuc, Tomislav ; Ječmenica, Radomir ; Trontl, Krešimir | Razvoj metoda i programa za proračun štitova od nuklearnog zračenja // Razvoj metoda i programa za proračun štitova od nuklearnog zračenja, 1998

• Pevec, Dubravko ; Šmuc, Tomislav ; Ječmenica, Radomir ; Trontl, Krešimir | Analiza 24 mjesečnog radnog ciklusa NE Krško u uvjetima povećanja snage, 1998

• Baće, Mile ; Grgić, Davor ; Jakopec, S. ; Knapp, Vladimir ; Kulišić, Petar ; Petković, Tomislav ; Pevec, Dubravko ; Šmuc, Tomislav | Analiza, provjera i proračun štitova za odlaganje radioaktivnog otpada // Arhiva Nuklearna elektrana Krško, 1989

Stručna ekspertiza

• Baće, Mile ; Knapp, Vladimir ; Kulišić, Petar ; Pevec, Dubravko ; Jakopec, S. ; Šmuc, Tomislav | Proračun štita za gama zračenje iz srednje aktivnog otpada nuklearne elektrane // Arhiva Zavoda za primjenjenu fiziku, FER, 1987